fam131c (fam131c)


Basic Information

Item Value
gene id fam131c
gene name fam131c
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 15364390 ~ 15397569 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU178746
GGAGGACGAGCAGCTCTACTCCCACCTGACGGACGAGATCAAGGAGGCACGCTTTGCTGCAGGAGTAGCAGAACAGTTTGCTTTGGCCGAGGCGTCGATGGAAGTATGGCCTTCACAAGACATTGTAGATCAAGCCACAGTCAGCACAGGCCCATTACAAGGTGCTGATGGCCTGTATCTCTCTCAGTTTCTCGTGGATGGAGGAAGTCTGGGTGTCCCCCAGCATCTGTACAGTATACACTTGGACCCCAACGCTGTTGAAAGAGCTAATCCTCTGGCACCTCAGCCAGAATCACAGCACCCCCTACAGGAGCAGAGGACTTTAGCACCTGATGGCAACGTACGGCACGCCGACAGCGGCTCAATTTCAGAAGATGAGGTTTTTTATGATTGAACATTGAAAAATATACAATGGAACCAGCTAAAGACATTGGCGCTCAGCTTACCTCGGACAACAGTGTAAAGATActacaaaaaaatgtacaaaagtatgaCTTGGTTGTTAAATACCATGAAGATACCTCTGAAGAGGTCACTGCCTTACTCTGTAGATGTGCATCCACCAGATCAAGACTCCATTCTCCATCTTCTTTTCAAGCATCCATtcaattacacattaacaaacgCCAGCTATCGCATGGTTCTGTTTTCCTGGACAAGCTGTTCACAGTCTGTTATACAGAGATGCTTTAAAGGAGCTCAGTAGTCACCTCAGTGCCAGGACTGCACacaagagaaaaacacaaaaacacacagcctcgcacaaaaagaaaagaaacacaaatgtGTGGGGAATTATACTGTGACTGAAAAAGGCAGCAGATAATGTCCATGATAGCAGCACCTGTAAATACCTCCTTACGAAACCCTTTCAGGTGGCTTGCCTTTTAGTATGAAAGCAGGAACCTGCCACAGCTTTGCAGGCTGAGATAATGCGGACGTTAAAAGActtctctttctcgttctctTTCAGCCAGACACTATTCAGACACGTCTGCTAAAAGTCATTCAAGAGCATCTCAATGAGACTGCGGGACAGAAAAGACTCGCTCTTTTGTGAGAAATGAAACTCGTCGGAGGATGAATGCGGTTTACGCTGTGCTGCGGAGCCGAAACCCAGGGCTTTGAAGATTTTAACGATTTCTAAGACCTACTTCTATATTTCCATGAAGCTTTTTTCCTGTGTAAAGATTTGTAGCTTTGTCAGGACTTCATGCCTTGTCCTTTCTACATCGAGCTCTGTAGACCTGCAAATGCTGTCTGTGTGTGATCTGTGGTTCATTTTGATGAAAAgactaaaacttaaaactagGTATGTCCCGATTCAGTCTATTGactcacacattttaatatattgggTATCAGCTATTTTGTCTATCAGTCTTTGTGTTAAACACAGTATTCAGAGTATGATCTGGTTTTCTTAGGGCTTTTTAATGGACTTCGTTACCCATTTAGCAGCACTGAGGACAGAGATAAGTTAAAGTCTGCAGTGTGGAACTATTTTACAttggaacataaaaaaaaacatataatatctGAAACTATATCACACTACACACTTGGGCTGcgcgatatatcgtttaagcatcgtcatcgcgatgtgcgcatgcgcaatagtcacatcacgggatgtgtgatgtcacttacggccatttaaatgcttgattattgttgttttgctgttttcctcgggttttgagtgcttggcTGACTCCAAAGTGCTGACTCAGTTCTCGGTTGGTCTGGATCTCTGTTGTGAGACAACACGCAGGTGGGGGTGGGGCTTGTGATGTTTAatgttgtttaatattgcgatacaaatcgccgaaaaaaaaaaaagcattttttttcacatttttccaatatcgtgcagccctaaagGAACTGGAA
>TU178747
tctccctatctgtctatctatctcctACACCCCCCTCCACTCTTTCAGCCCCACAGATGGCAGGAAGTGCTTCGCTCTATCTGAGACATcaagttctttcttttctccctgACAAATTCCTGCTTATTTCTcagcttttctttattttactgcttttttcCTCCCCCTTTCCAGAAGACCCCCATCTCTGAAGCTCTCTCACTCATCCCTGATCTTCCCCCTCTCATCCTCTCCTCCTTCAGCATGGTGAACAGATAACTACCTGGCTGATGGTCACCATGGGCGCCTGCCTCTGCAAAGGTCACCAAGACCTTCAGAATGACCAGCAGCATCCCATGGGAGAACTTAAATATTGGTCTGAAGGAGAGCCCATTGCCAAGGGCAATCATCAGCCTCACAATGGCTCTGTGACAGATAAGAAGGACGGCAGTGGCTACAGCATCGGGGAGCTGGCGACGTCCTCCTTGATGGGTCTGGTGGCCACTATTAAGGAGCACATCACTAAGCCTACGGCGATGGCGCAGGGTCGAGTTGCCCACCTGATCGAGTGGAAGGGTTGGGGAGGTGA
>XM_007246247.2
AGCAAGCAGGCAATGTGTGCTCATGTtttctttcccctctctctctctctctctctctctctctctctctctctctttctctctctgtgtctccctatctgtctatctatctcctACACCCCCCTCCACTCTTTCAGCCCCACAGATGGCAGGAAGTGCTTCGCTCTATCTGAGACATcaagttctttcttttctccctgACAAATTCCTGCTTATTTCTcagcttttctttattttactgcttttttcCTCCCCCTTTCCAGAAGACCCCCATCTCTGAAGCTCTCTCACTCATCCCTGATCTTCCCCCTCTCATCCTCTCCTCCTTCAGCATGGTGAACAGATAACTACCTGGCTGATGGTCACCATGGGCGCCTGCCTCTGCAAAGGTCACCAAGACCTTCAGAATGACCAGCAGCATCCCATGGGAGAACTTAAATATTGGTCTGAAGGAGAGCCCATTGCCAAGGGCAATCATCAGCCTCACAATGGCTCTGTGACAGATAAGAAGGACGGCAGTGGCTACAGCATCGGGGAGCTGGCGACGTCCTCCTTGATGGGTCTGGTGGCCACTATTAAGGAGCACATCACTAAGCCTACGGCGATGGCGCAGGGTCGAGTTGCCCACCTGATCGAGTGGAAGGGTTGGGGAGGTGAGATGACGGCTGGAGGGGGTTGGTGCGGCTGGACTCGGGACGGAGGGGGCTGGGGAGGAGCGGGGGCTACGCTGCAGGAGGACGAGCAGCTCTACTCCCACCTGACGGACGAGATCAAGGAGGCACGCTTTGCTGCAGGAGTAGCAGAACAGTTTGCTTTGGCCGAGGCGTCGATGGAAGTATGGCCTTCACAAGACATTGTAGATCAAGCCACAGTCAGCACAGGCCCATTACAAGGTGCTGATGGCCTGTATCTCTCTCAGTTTCTCGTGGATGGAGGAAGTCTGGGTGTCCCCCAGCATCTGTACAGTATACACTTGGACCCCAACGCTGTTGAAAGAGCTAATCCTCTGGCACCGGCACAGCCCCCTCAACCTTACTTCCCTCAGCCAGAATCACAGCACCCCCTACAGGAGCAGAGGACTTTAGCACCTGATGGCAACGTACGGCACGCCGACAGCGGCTCAATTTCAGAAGATGAGGTTTTTTATGATTGAACATTGAAAAATATACAATGGAACCAGCTAAAGACATTGGCGCTCAGCTTACCTCGGACAACAGTGTAAAGATActacaaaaaaatgtacaaaagtatgaCTTGGTTGTTAAATACCATGAAGATACCTCTGAAGAGGTCACTGCCTTACTCTGTAGATGTGCATCCACCAGATCAAGACTCCATTCTCCATCTTCTTTTCAAGCATCCATtcaattacacattaacaaacgCCAGCTATCGCATGGTTCTGTTTTCCTGGACAAGCTGTTCACAGTCTGTTATACAGAGATGCTTTAAAGGAGCTCAGTAGTCACCTCAGTGCCAGGACTGCACacaagagaaaaacacaaaaacacacagcctcgcacaaaaagaaaagaaacacaaatgtGTGGGGAATTATACTGTGACTGAAAAAGGCAGCAGATAATGTCCATGATAGCAGCACCTGTAAATACCTCCTTACGAAACCCTTTCAGGTGGCTTGCCTTTTAGTATGAAAGCAGGAACCTGCCACAGCTTTGCAGGCTGAGATAATGCGGACGTTAAAAGActtctctttctcgttctctTTCAGCCAGACACTATTCAGACACGTCTGCTAAAAGTCATTCAAGAGCATCTCAATGAGACTGCGGGACAGAAAAGACTCGCTCTTTTGTGAGAAATGAAACTCGTCGGAGGATGAATGCGGTTTACGCTGTGCTGCGGAGCCGAAACCCAGGGCTTTGAAGATTTTAACGATTTCTAAGACCTACTTCTATATTTCCATGAAGCTTTTTTCCTGTGTAAAGATTTGTAGCTTTGTCAGGACTTCATGCCTTGTCCTTTCTACATCGAGCTCTGTAGACCTGCAAATGCTGTCTGTGTGTGATCTGTGGTTCATTTTGATGAAAAgactaaaacttaaaactagGTATGTCCCGATTCAGTCTATTGactcacacattttaatatattgggTATCAGCTATTTTGTCTATCAGTCTTTGTGTTAAACACAGTATTCAGAGTATGATCTGGTTTTCTTAGGGCTTTTTAATGGACTTCGTTACCCATTTAGCAGCACTGAGGACAGAGATAAGTTAAAGTCTGCAGTGTGGAACTATTTTACAttggaacataaaaaaaaacatataatatctGAAACTATATCACACTACACACTTGGGCTGcgcgatatatcgtttaagcatcgtcatcgcgatgtgcgcatgcgcaatagtcacatcacgggatgtgtgatgtcacttacggccatttaaatgcttgattattgttgttttgctgttttcctcgggttttgagtgcttggcTGACTCCAAAGTGCTGACTCAGTTCTCGGTTGGTCTGGATCTCTGTTGTGAGACAACACGCAGGTGGGGGTGGGGCTTGTGATGTTTAatgttgtttaatattgcgatacaaatcgccgaaaaaaaaaaaagcattttttttcacatttttccaatatcgtgcagccctaaagGAACTGGAAGCTGATTGGTCCGTCCCGACTCGAAAAAAACCCcagtaattttttaaaagtcaCAGCTAATTGTTCTGTTATATAAAATGATGAAGTGAATAAAGTGTGTTATgctgaacaaataaaaaagtgaagtaaTTTA

Function

symbol description
fam131c Orthologous to human FAM131C (family with sequence similarity 131 member C).

NR:

description
protein FAM131C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178746 False 1893 TUCP 0.43 4 15375657 15397436
TU178747 False 568 TUCP 0.52 4 15364479 15375581
XM_007246247.2 True 2785 mRNA 0.46 6 15364390 15397569

Neighbor

gene id symbol gene type direction distance location
epha2 epha2,epha2b,LOC107591085,LOC107737541,LOC107673100,LOC107687430,LOC107593930,LOC107716125 coding upstream 35074 15291328 ~ 15329316 (+)
spen spen,LOC107737540,LOC107591084,LOC107716126,LOC107593929 coding upstream 128174 15195555 ~ 15236216 (+)
tmem82 tmem82 coding upstream 173970 15184896 ~ 15190420 (+)
LOC103024219 NA coding upstream 180823 15182350 ~ 15183567 (+)
LOC103029072 NA coding upstream 186350 15174123 ~ 15178040 (+)
hspb7 hspb7,LOC107591086,LOC107578967,LOC107716085 coding downstream 37191 15434760 ~ 15440599 (+)
zbtb17 zbtb17,LOC107737543,LOC107591087 coding downstream 45811 15443380 ~ 15456553 (+)
plekhm2 plekhm2 coding downstream 69803 15467372 ~ 15490494 (+)
LOC103029593 ano7l1,ano11,LOC107591089,LOC107737547,LOC107716119 coding downstream 107212 15504781 ~ 15529128 (+)
arhgef19 arhgef19,LOC103384789 coding downstream 137576 15535145 ~ 15575450 (+)
G132148 NA non-coding upstream 84243 15279797 ~ 15280147 (+)
G132115 NA non-coding upstream 183535 15178856 ~ 15180855 (+)
G132110 NA non-coding upstream 217307 15146348 ~ 15147083 (+)
G132081 NA non-coding upstream 639320 14724646 ~ 14725070 (+)
LOC111194092 NA non-coding upstream 1149573 14212780 ~ 14214817 (+)
G132205 NA non-coding downstream 85359 15482928 ~ 15483289 (+)
G132211 NA non-coding downstream 133562 15531131 ~ 15531469 (+)
G132231 NA non-coding downstream 139135 15536704 ~ 15537444 (+)
G132232 NA non-coding downstream 148845 15546414 ~ 15627127 (+)
G132233 NA non-coding downstream 172604 15570173 ~ 15570741 (+)
G132146 LOC106581475 other upstream 123993 15240080 ~ 15240397 (+)
G132109 szrd1,ca144,LOC103023907,LOC107687433,LOC107716129,LOC107673108,LOC107737539 other upstream 191493 15168008 ~ 15172897 (+)
G131677 NA other upstream 2423543 12913491 ~ 12940847 (+)
sall4 sall4 other upstream 2600680 12689154 ~ 12763710 (+)
LOC103031050 NA other upstream 3030300 12240696 ~ 12334090 (+)
ddost ddost,LOC107673085,LOC107687429 other downstream 62293 15459862 ~ 15466085 (+)
LOC103031494 NA other downstream 333328 15730897 ~ 15737781 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other downstream 2082369 17479938 ~ 17524353 (+)
snrpg snrpg other downstream 2108882 17506451 ~ 17509815 (+)
G133076 NA other downstream 3645925 19043494 ~ 19044186 (+)

Expression


Co-expression Network