CI01000012_00502185_00516358


Basic Information

Item Value
gene id CI01000012_00502185_00516358
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 500151 ~ 516908 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00502185_00516358.mRNA
GAATAAAAAGTTACAGCTGTGTTGTTTATAGAAGAGCCAAAAAGGGCATTGAGAAGAATTATCACGTGATTTACAGAGAAAAGGCTTTTGATTAGATACACTTGGAGACCTTAAGCATTGGACCCACACCCTCGTTTATGGTAATTACAGGTTACTCCAGGGGTTTATGTATGCATGTTTGTGTATGTGTTTAATAAATCCTCTGTTTCCTTTATATGGTTGGATTTATGTGTTTACGGTTTACTCTTGCTCGCATTCATGAACACACATTCTCACACACATACCCAGCATAAGACTCTCTAAGATGTTTTGATGAATCAGAGTAGTTGAGGGCAAACGCAGTGTGAGAATGTAGCAACTCTAAATGCAGTCACACACACACTCAAAATATGTACAGTGAGTGGAACTAAAGGTGTGTTCAGTTTCATCTAAAACAGATGAATGTAAATCTGGCAACGTTTTACAGGGTTTTTTTTTATTTTTTTTATTTGCTTTGGTACTATTTTCACAAATAAGGTGTATATTGTCAATACTCTTAGTACAAAACTCCAAACTGATCACACTTCTAACACAGCTAGTCATTCTTTCAAAGCTTGATCTCATATTTTTGTTCTAGTTGTACAAATTTTCATTCTACATAATCACTGTTTCAAAACACAAGATCATTGTGATATGAGAACATTTGGTTTAATCACCGAAACACAACAGTATGATCTTCTTTCAGTTTAGTACTTTTAACAGTCAGTTAATTAAATGGCAAACAATGCAAGATACATGTTTCAAATCACCCTTGGCTTGTTGCTGAAATAATTACAGTTGCACATGCTACAGATGCCACATTAGAAAATACATTTACATTTACATTACCTAAATTACATAATGGACATAAAATCTATTATGTTTATAATAGTATTTATTCAGTGTGTTATCTAAAGTTGTAAAGTGTGACACAGTCATGAGGTTTTGTGTAGAACAGAGTTTGCTGCCAATACAGTACATGTTCTTACTGCACCATATGACTGAATCTATACTGTAGTTGACCTTTATAAGGGTGAGTTATAGTAATGTGGCAATCTCTAACATGGTAATACCTCTGTTTGCAGTATCACATAGCATACTATAATGTAAAATGATGCCATCTGTTTCCCGTCTTCTGATGCATCTTTGATCAATCTGATGTTGTACAGCTATTGACTGTTTCTTTTCCCTTGTACTCTGTCCTGCTCTGTTCACAAATTTCAAATCCCCCTGTATCTATCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCACATGCGTGGGCGTGTGTGAGAGCGCATGTATTTGCTTTTTTCTGTTTCCTTTTTTTTTTTTTTACTTCTAAGTTTGTTTATTTGATTTAGTATTTATCTTGCGTGTGTTTTGCTCGTGCTGCCTGCTTTCTTAGAAAGCATGGCAGCTCAGGGTGGGAATGGGCTTGATTTCCTCACACGGCGTCACAGAGTTAAAATAGTATCTGTGGTGAGTGTGGAGGCTTGCTGGGTGTAGAAGTTGTTGGCCATCAAAACATTCTCTCTGCATCCAGAATGAATAACGCGACCGTGATTTTTTTTAATACGGTGGAAAGAGCAAACGAGGTGGTAGCGCGAGGAATAATAATTGATGAAATACTTACACCTGTTTTGCCTCTAATGTTACCATCAAAGAAAGTCACAATATCGAATATCCCTCCATTCCTTAGTGAGGATATTTTGACACAAGCGCTTTCACGTTACGGAAAGTTGGTTTCGCCGATCAGAAAGATTGCGATCGGGTGCGAGTCTCCTTTATTGAAACATATTGTTTCATTTAGGAGATTCGCTTTCATGATAATCAAAGACGAAGCTGAACTGGACTTGGCACTAAATTTCCGTGTGGACGATTTTGAATACGTAGTGTTTGTAATACTGACAAAATGAAATGCTTCGGATGTGGTAAATCGGGCCACTTTATCCGTTCATGCCCTGACAAGAGTAACGTAGCTGGAGGTAGTAAGGATAGTGCTGCAAATGAAGAAGACAGGCCTACTGCAAAAGGTCGGTCTGGCCGAAGCAGTGCCGATCGCGGATAAACCTGCCGGGGAAGGAACATCTGTCTTGGGGCCTGTGGAAGCTGGATCGACCTCAAGGGAATCAATGAATGAAGCGATTAGGAGTGCAATTGGTTTTTATGAGAAACTGTACAGAAGTGAATTAGGCCCAGACAATATCAGTGAGAGTGTCTTCTTCAAGGATTTACCAAAGGTGTCTGATGAAGCAAATGCAGAGATCTCAGGTGCACTCAGCCTGGGAGGACTGCATAAGGCTGTTCAGAGCATGGAATCCGGAAGGGTGCCTGGAATTGATGGCATACCTATAGACTTCTATAAATGTTCTTGGGATGTTTTAGGAGAGGATCTCTTAGAAGTACTCAATGGTAGTTTGGACGAAGGTCTTCTACACTTTGAGTTGCCAGAGAGCAGTCCTAACCCTCCTTCCCAAAAAAGGAGACCTCACAGAGATCAAAAACTGGAGTGCAGTGACTATAAACTTCTTTCAAAGATTTTAGCAAACAGACTATCAAAAATTATGAATAAGGCGATCCATCTGGACCAAACCTACTGTGTCCCCAAAATAAAAATTCCACTAGACTCCTCTAAATTCAGTGAAACCAATAACTTTGGAAAAAGTTCTTCGTCATTGGTAGTGATTTCTCCCACGCAATATTTCCTGAGTAATTTAGTCTCTTCTGCTGTAAGGACAGTCTTTATCTTTTGTATCAATTTTTCAGTCACTCGAGTGGATCTAACCCCCAGTTGTACTGCCACCACATTCACCTCCGTAAGATCTGATAAGTTGTGTGTTTCTGATATTAAAGGCATGGTGAAAAGGAGGAGTACTTTGTTTTCTGTGGACCAAATCATTGTTAATAGCCACAGCACCACTTTCAGTGATACTGTTGAGTTTGCGTCTTACAACTACCTGAACATCTCTTACCCAGCAGGCCAAGGAGCAATGCTGGAGTTCTTGCAGAGATGCCTTTTCAAGATAAACCCCAAGGGATCGAAAGCTGAGAAGAAACTTCAAGAAAGCAGATGATGGTCAGTCCACAGCATATGTGTCAAACTCCGCTCCTGGGGGGCCACTGTCCTGCAAAGTGCATGCTCCAACCAGTTCTAGAACACCTGCCTGGAAGTTTCTAACAATCCATGAAGACATTGGTTCAAGTGTGTTTAATTAGTTCCTGGAGGGCCACTGTCCTGCAGAGTTTAGTTCCATCCCTGAGTTTGACACCCTTGTTCAAAAGGTTCTTTTACTCTGAACTAAAATGGCAGACTATGAATAGAAGGCATACATGGGGAACATTCTTCAGAAGAGAGTCCAATCTCCCTCAATTCACTTACACAGAAATTTTCCTCAGTGTCACGCGGACTTTGAGAAAACTCACTCTTTCCTGCTTTGTTTAATTGTTTGTTTTTAATGACTCCTTGTAATTCATCTGTCGACCAGTTGTCAGGTTTTGAAGGCAGACTGTTGAATTATTACATTTGTTTCATTTGTAACAAATTGTTGTATTTTTATTAAGTATACTGCTGCAATTGTTTTAAAAGCATTACTAGTTTTAAAAATGTTTTTGGCTTTTTATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00502185_00516358.mRNA True 3652 mRNA 0.39 6 500151 516908

Neighbor

gene id symbol gene type direction distance location
CI01000012_00318129_00318595 NA coding upstream 180733 318129 ~ 319418 (+)
CI01000012_00194370_00195347 HCAR1-3 coding upstream 304475 193903 ~ 195676 (+)
CI01000012_00030966_00032941 NA coding upstream 467096 28818 ~ 33055 (+)
CI01000012_00593086_00594741 NA coding downstream 75218 592126 ~ 595465 (+)
CI01000012_00644021_00646785 NA coding downstream 127113 644021 ~ 647075 (+)
CI01000012_00886127_00889703 NA coding downstream 368212 885120 ~ 890337 (+)
CI01000012_00979848_00986445 NA coding downstream 462940 979848 ~ 986745 (+)
CI01000012_00991831_01027918 NA coding downstream 474267 991175 ~ 1028035 (+)
G68429 NA non-coding upstream 10494 489299 ~ 489657 (+)
G68425 NA non-coding upstream 18199 481744 ~ 481952 (+)
G68416 NA non-coding upstream 41427 457998 ~ 458724 (+)
G68410 NA non-coding upstream 63783 435889 ~ 436368 (+)
G68409 NA non-coding upstream 66389 433521 ~ 433762 (+)
G68450 NA non-coding downstream 777 517685 ~ 517894 (+)
G68453 NA non-coding downstream 5175 522083 ~ 522424 (+)
G68421 NA non-coding downstream 10066 526974 ~ 527306 (+)
G68656 NA non-coding downstream 49814 566722 ~ 566959 (+)
G68657 NA non-coding downstream 59331 576239 ~ 576507 (+)
G68282 NA other upstream 439619 26390 ~ 60532 (+)
G68660 NA other downstream 18658 535566 ~ 535953 (+)
G68725 NA other downstream 166615 683523 ~ 684856 (+)
G70029 NA other downstream 2105570 2622478 ~ 2631385 (+)
CI01000012_04424569_04425090 NA other downstream 3903331 4424569 ~ 4425756 (+)

Expression


Co-expression Network