CI01000012_00593086_00594741


Basic Information

Item Value
gene id CI01000012_00593086_00594741
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 592126 ~ 595465 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00593086_00594741.mRNA
GCATATAACACGGACAACTTTACATGTTACATGAACAAGACTTTATTAATTAGACTAAACACTTAAATCTAGACTAAAATAATCTAATCTCTTTAACCTGGCATACACATAACACATTATCAATTTATATTTTCAAATCCATTAAAGGATTATTAGGCTGCATAAATTAGGTCAACCGGAACCGGGAACACTTCCTATAACACCTGATGTACTCGTTACATCAGAAGAAGAATGGCATCTACACTAATATTAGTCTTTCTGTTTATCCCGAGGTTTACCGTAGTCAACCGGATCCGGGCCGTATCCAGGCGAGATTGAGGACCTGCGCCTTGACAGGACCACAACGCAGCCCTGAAGTATCAGCAGAGATTGAGTCAACTAGATCATCCATTGTGAAGGCCTCATCGACACGACAACCAGTGGCATAGTTCCTCAACAAACTGTCCATACCCACGTGATGAATACAATTCTCAACTGGATGGAACTGGAATAAATACTTTTTTTTTTTTTCAAAGCACTGTTCGCCAGAGGAGAACTGGCCCCCTGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCTTTTTAACACCTATTTGCCACCTGATGTCACCTGTTGGAGTTTGGGTTCCTTGCCACTGTCGCCTTTGGCTTGCTTAGTTGGGGACACTTGACATTTGATATTCAACAGTGCTTTGCATCTGCCTGCATTGACACCATTTTCTTTAAGAGCTGCTGTGCAGCCAAAATTATATACCAGTTATCACTGTAAAGCTGCTTTGACACAATCTGCATTGTAAAAAGCGCTACATAAATAAAAGTGACTTGACTATAGAGTCTGGGAACGTGACGTCAGCAACGCAATGGATGTTGGGACTTTAGGTCACGGAGCTGCGGTAGACACTGTGTTGGATTGTGATCGCGAAGTTTTAGTTTACTTTATTCTGCAAAAATAATTTACAATGGTGAACTCTTGTTGCATTGTTAATTGCCACAATCACACTCACGACCAGCATGTACGCCGACTGTCAAATGGAGTTCGATTTTTCAGCTTTCCAGCTTGGAAAAAGCACCTTGGATCCCAAGTGTCCGAGCTAACAAAACGGCGTCGCATGGCGTGGGTAGCAGCAGTTAGACGGAAAAGCATTACTTTTACCAACATCCCCAGGCATGTTTGTTTGTTCACAGCATTTCCACAAAGGAGGCAAAAAGCTATCACTGAGGATGACGCTGCACCCGCAGCACTACATGTAGCACTACATGAAGCTGCAAAAGCAGATGATGGTCCACAGATGGAAGACGCAGGGCCAAATAACAACACTGCAGAACAGCTGGAATGCCATCTTTGTAGCTGTAGGCGTGCTGAAATTGACCGCTTGTTAGAGGAGAACCGGAGACTCAAGAAAGAACTTGCTGAAAAGAACATGGAAGAGAATTCTTTTAAAGATGATGATGCGAAGGTCAGGTACTACACCGGACTTCTGTGTTTTGTGCTTCTGATGGGTGTGCTGACACAGCTTCTTCCCTGCCTGCAACAGACTGGCCGAAAACTCTCACCTTTTCAGATGCTCCTTTCAACACTGATGCACCTCAGACTGAATCTGCCAATTCAGCACATTGCATACCTCTTTTCTGTAGATCGAAAGATGGTGTCCACCACATTCAGAGATACCATAGGCACTATGTTTAGATACCTCAAACCTCTGATCGTGGGTTTGACATCAGAGACAGTGTTGGACTCTTGTGCAGAAGTGAAAACACCTGCTTTCACAAGAGGATGCAGGCAGCTGGATGCAAAAGATGTGGAGGAAACATGCCGGATAGCTCACCTCAGGGTGCATGTGGAGAGGTTGATTGGATGTGTACGCACAAAGTACACTATATTGAATGGAATCGTTCCAATAAACATGGCACTCCCATGTAGAGATGAGGACATGACGTTCCTGGACAAGATTGTGACTGTAAGCTGTGCTTTGACTAATATGTGCCCCAGCGTTGTTATGAAACCATAAACTAAGAAATAATGCTGTCAAATCGATTGCTCTCAAGGAATGTCATCCAACATAAATGTTTCTGTGTAGATATGTTCATGTATTGTGTGTATTTATAGAATTTAGATTTTATGTGTGACAATATGTTGTGTATTTAAATTTTATATGTACATATATAAAATGTAAATTATTTATATATCCACTAGTCAACATTTGAAGTGGATCAAAACCTTTCATCAAAGTTGTAATAAAACCTAAAATCAGAATGCGTCCTTGTCTTAGGACAACTTTAACTTTTTTGATCCACTTCAAATGTTGATATATATAGATAGTACACACATAGATATTACACATGTATGTGTACTTATACATACACACAAACATGTTAAAATGTTATTTTACATGTGATTTATACTTTTCAAATGTTTTACACTGACTATTTTAACACGAAATACTGCATTCATTAAAAAGTAATATAAAAATATATTTGTTAATTTTTTTTATTTTCAATGGGCAGAAATTGATTGTAACTATTACATATTAATTAGTGCCATGAAATTATCTCAAAATACAAAATAAAAAAGATTATTGAACAAAAATTTAGTACATTGATTTTACTGGGGTGAAAAAAAAGTTACATTTTAGGTGTTTGGTCACTTTTGACTGTGAAGATCCACAAGTGTGACTCCCAAATAAGGAGCACCAGAGGGTTAAATGGTCAGTCTATCCTTAACACAAAAAGGCA

Function

NR:

description
hypothetical protein cypCar_00049662, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00593086_00594741.mRNA True 2734 mRNA 0.39 3 592126 595465

Neighbor

gene id symbol gene type direction distance location
CI01000012_00502185_00516358 NA coding upstream 75218 500151 ~ 516908 (+)
CI01000012_00318129_00318595 NA coding upstream 272708 318129 ~ 319418 (+)
CI01000012_00194370_00195347 HCAR1-3 coding upstream 396450 193903 ~ 195676 (+)
CI01000012_00030966_00032941 NA coding upstream 559071 28818 ~ 33055 (+)
CI01000012_00644021_00646785 NA coding downstream 48556 644021 ~ 647075 (+)
CI01000012_00886127_00889703 NA coding downstream 289655 885120 ~ 890337 (+)
CI01000012_00979848_00986445 NA coding downstream 384383 979848 ~ 986745 (+)
CI01000012_00991831_01027918 NA coding downstream 395710 991175 ~ 1028035 (+)
CI01000012_01054663_01055748 NA coding downstream 459198 1054663 ~ 1058353 (+)
G68653 NA non-coding upstream 3706 588037 ~ 588420 (+)
G68657 NA non-coding upstream 15619 576239 ~ 576507 (+)
G68656 NA non-coding upstream 25167 566722 ~ 566959 (+)
G68421 NA non-coding upstream 64820 526974 ~ 527306 (+)
G68453 NA non-coding upstream 69702 522083 ~ 522424 (+)
G68690 NA non-coding downstream 31718 627183 ~ 627618 (+)
G68694 NA non-coding downstream 36517 631982 ~ 632195 (+)
G68699 NA non-coding downstream 38944 634409 ~ 634614 (+)
G68719 NA non-coding downstream 63738 659203 ~ 659468 (+)
G68696 NA non-coding downstream 81530 676995 ~ 678472 (+)
G68660 NA other upstream 56173 535566 ~ 535953 (+)
G68282 NA other upstream 531594 26390 ~ 60532 (+)
G68725 NA other downstream 88058 683523 ~ 684856 (+)
G70029 NA other downstream 2027013 2622478 ~ 2631385 (+)
CI01000012_04424569_04425090 NA other downstream 3824774 4424569 ~ 4425756 (+)
CI01000012_04495631_04501066 NA other downstream 3902988 4495631 ~ 4501066 (+)

Expression


Co-expression Network