CI01000012_00644021_00646785



Basic Information


Item Value
gene id CI01000012_00644021_00646785
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 644021 ~ 647075 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000012_00644021_00646785.mRNA
ATGACCCCAGAGACCATCTGTGAGCACTCAACCCTATTTATCATGGCCACAGAGGCTGTTAATGAACTGTGCCCTGTTAACACCTTCATTGCCAAAGAGACTACGAAAGCACCCTCTGGTTGTCTATTCTCAGTAAACATGTCTGATGTTGAGCTACCTGTCTGTTCTGTTTCAACCGATGAGCCTGGGTGTACACTGTCTGCCAGTCCAGTTTCAAGAAATGAATCTGACCATAAACTGTCTACCTGTTCAGTTTTCTCAAACGTGTCTGATTTTGAACTCTCTGTCTTGTCAGTTTCAGTCAGTGAGTTTTATGATGAATCGTCTATCTGTCCAGTCTTGTCAAGTGTGTCTGATTTTGAACCATCTGTTTTGCCAGGACTACCATATGGGGTGGTTAGCGCACCCGCGAGTTTTCAGAAAATCATGGATCAGGTACTTCAAAGCCTGGATGGGGTAATCTGTTACCTTAATGATATCTTGATAACAGGAAGGGACACAAAAGAGCATATGGAAACCTTAGAAGGAGTTCTAAAGAGGCTTCAAGCCTACAATCTCAGAGTCAGAAAAGAGGTTATTCACCCCATGAACGAAAACACTGAAGCAATTGAAAAGCCCCTTGTGCCTACAAATGTAACTGAACTCAGATCTTTTTTGGCTCTGTTAAATTATTATGGCAAGTTCATTCCAAACTTTTCCACCATCATCCAACCCATGACAGAGTTGTTGCATAAAGATATGGACTGGAAGTGGTCAAAGGAATGTCAGATTGAGTTTGAGAATTCCAAGAGGCTTTTGATGTTTTGATGTTAATGTTTGATCCATTTCAACACTGAGCTACTCTTAGTTTTGGTGTGTGATGCCTGTAATCTCCCACAAAATGAGTGACGGTAGTGAAAGACCTATCACTTTTGCCTCTAGAATGTTGACAAAAACTGAGAGAAACTATTCTCAAATTGAAAAAGAGGCTTTAGGATTAGTGTTTGGAGTGATGAAATTCCTGGGTTCTAGGTAAAGGATACTGTTCTACTTCCAACCAGGGGTTAATATTAACCTTGTAGTCTCCACAGATCCTTACACTATTGCCCTTTTTGGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000012_00644021_00646785.mRNA True 1097 mRNA 0.41 3 644021 647075

Neighbor


gene id symbol gene type direction distance location
CI01000012_00593086_00594741 NA coding upstream 48556 592126 ~ 595465 (+)
CI01000012_00502185_00516358 NA coding upstream 127113 500151 ~ 516908 (+)
CI01000012_00318129_00318595 NA coding upstream 324603 318129 ~ 319418 (+)
CI01000012_00194370_00195347 HCAR1-3 coding upstream 448345 193903 ~ 195676 (+)
CI01000012_00030966_00032941 NA coding upstream 610966 28818 ~ 33055 (+)
CI01000012_00886127_00889703 NA coding downstream 238045 885120 ~ 890337 (+)
CI01000012_00979848_00986445 NA coding downstream 332773 979848 ~ 986745 (+)
CI01000012_00991831_01027918 NA coding downstream 344100 991175 ~ 1028035 (+)
CI01000012_01054663_01055748 NA coding downstream 407588 1054663 ~ 1058353 (+)
CI01000012_01060250_01062758 NA coding downstream 413110 1060185 ~ 1062758 (+)
G68699 NA non-coding upstream 9407 634409 ~ 634614 (+)
G68694 NA non-coding upstream 11826 631982 ~ 632195 (+)
G68690 NA non-coding upstream 16403 627183 ~ 627618 (+)
G68653 NA non-coding upstream 55601 588037 ~ 588420 (+)
G68657 NA non-coding upstream 67514 576239 ~ 576507 (+)
G68719 NA non-coding downstream 12128 659203 ~ 659468 (+)
G68696 NA non-coding downstream 29920 676995 ~ 678472 (+)
G68726 NA non-coding downstream 38573 685648 ~ 686150 (+)
G68731 NA non-coding downstream 42973 690048 ~ 691318 (+)
G68740 NA non-coding downstream 56802 703877 ~ 705039 (+)
G68660 NA other upstream 108068 535566 ~ 535953 (+)
G68282 NA other upstream 583489 26390 ~ 60532 (+)
G68725 NA other downstream 36448 683523 ~ 684856 (+)
G70029 NA other downstream 1975403 2622478 ~ 2631385 (+)
CI01000012_04424569_04425090 NA other downstream 3773164 4424569 ~ 4425756 (+)
CI01000012_04495631_04501066 NA other downstream 3851378 4495631 ~ 4501066 (+)

Expression



Co-expression Network