G132588


Basic Information

Item Value
gene id G132588
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 17466270 ~ 17468214 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU179317
ccccaccccaacccaattatacacttacatcttttacatttgggggggggggggggggtatgttgggtcaccaaagcttacaatggtaaaaatatgggtccctgaagaaaaaggttgggaaccactgatcTAACAAACaatgttataagaatgtttagcaatgttttaaaaaggttccaggaaggttaacCTGTGTACtgttacaaaaataatgttCAACAAATGttctaaaacatgtaaaagttattagaacatttcttaCACAACGTTCCCAGCTAGACGAATACTAGCattatgaaaatgttaaaaagtgacACTCCcacaactaaaaatgaaaacacttaCACACGTGACAGTGTAGCAATGTTACCAGAacactaattttttttaaataaaaacattcaaagaacatccagaaaacttgacagattgaacgTTCTAAGAAtattaactgtaacatttagAAAACGTTCTTCTAACCAAAAACTGTTACAGCAAAAGCGTCTCCAAGCAGAAACAAAGCTGGAGAAACAGAAAGTTCCTGATAAATCAAATCAGAATTGTTTAGCTAGAGGTAATTACCAAAAACATGTAAGAACatgataatacatttttaaagcacaGCGTATTTCAAACTTCTGTTCTTATAATAATCCCATTATCCATTATCCAACTCACTAACTGAACAAATCCCAATtcccaataaaacattttattaaactttaaaaacgGTTGGTGAATAAGTCTTGTGATTTAGTGTGTGAGGAAGTCCAGGTTTTAGTTGTACATGGccataaattatattattgataTGTTAACACCATTTTATACCATTATTATAATGACAGAATACAGTAGTAGCACAAAAATTAGACCATTTTTTCAACTCAGTaaagttttaattattaagaatattctgACATTAAATTTGGACAAAtccagcaaaataaataaaaaccctgTTTTAGAAGATGGTGAGTTAGAGATGGGAGAGTGAATTTATTTTGGTATCTGAAAATGGCATCAGTGTCCTGGCATTAATATACCTGAaatctaatatattcattctaaaaacagtgATAAAAATGTGAACTGAGttgtctggtaggtttgttggatgtaaaTGGTTTATAGATTCTGAAAGTttttcataaataaacaaaattaccaAATATTATACTAAAAGCAGAATTTCATAcagaaatgtatttacattaacctgcattaaaatatTCTTCCACATGTATTCTGTAATTACAcactctcaccagagaggtcgcTACATTCCCAAAACTTGCAGAAAGTcactttaaagtaaataaaaatactggcATATTCATGTTAATGGGCTCTTCTCAGTTAGTAACACATCGGCTAATATTAAGGCAAGAAAGATTACTAAGTCCAtggacaaatataaaataacatggATAACAGTGGATaaaatgcatttatctgaaataataaaatgcaataaaatgccATTCAGTAAAAATTGCCTTAAGTAAATGTGTGGTCCCAAAACAGGTATAATTGACCACTGGTGACCTATTAGGTTCGCTTTTAATGTGGTCATTcctagtgtttttttatcatttccacAATGAGACTTAAATACGATTGGATTGTCACAATCTACCCATCTTTCTTTCCATCCTGTCTTGTCTTCTAAGTAAAACTATTCTTATTTGTTAATTgtgcaatacttttttttattttgactgtGTGAATTTCTgatataaaatgtactttgtcATGCACTCAAGAATAAGAATGACATGCATCCGAATGCTGCCATGTCATTGATACAGGAAAATCcaatgtgaaaaatgtattaGGAGAGACATGCAAATTGATAGGCTGCATGAAGTTTGTTTGGGGTAAGTGTCCTTCAGCcttgatgtgtgtttttaagGACCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179317 True 1922 lncRNA 0.32 2 17466270 17468214

Neighbor

gene id symbol gene type direction distance location
LOC103024256 LOC108425513,LOC107671862,LOC107697970,LOC107756420 coding upstream 5437 17376371 ~ 17460833 (+)
LOC103047606 si:ch211-210c8.6,LOC108425517,LOC106567173 coding upstream 117464 17342501 ~ 17348806 (+)
dazap2 dazap2 coding upstream 156206 17301927 ~ 17310064 (+)
LOC103025506 LOC108425525 coding upstream 428239 16955751 ~ 17038031 (+)
LOC111194095 NA coding upstream 598937 16854268 ~ 16867333 (+)
cs cs,LOC107707042,LOC107697968,LOC107671863 coding downstream 3268 17471482 ~ 17486999 (+)
LOC103046182 NA coding downstream 30549 17498763 ~ 17504064 (+)
fam50a fam50a coding downstream 75568 17543782 ~ 17562016 (+)
LOC103023305 NA coding downstream 96193 17564407 ~ 17589725 (+)
sars sars,LOC107671868,LOC107697960 coding downstream 132910 17601124 ~ 17627589 (+)
G132586 NA non-coding upstream 90608 17372066 ~ 17375662 (+)
G132585 NA non-coding upstream 102138 17362582 ~ 17364132 (+)
G132547 NA non-coding upstream 241615 17222902 ~ 17224655 (+)
G132549 NA non-coding upstream 243714 17184100 ~ 17222556 (+)
G132550 NA non-coding upstream 277786 17187875 ~ 17188484 (+)
G132718 NA non-coding downstream 261103 17729317 ~ 17734305 (+)
G132741 NA non-coding downstream 276747 17744961 ~ 17746840 (+)
G132750 NA non-coding downstream 303140 17771354 ~ 17771564 (+)
G132752 NA non-coding downstream 305521 17773735 ~ 17773996 (+)
G132767 NA non-coding downstream 433059 17901273 ~ 17902022 (+)
LOC103031494 NA other upstream 1728489 15730897 ~ 15737781 (+)
ddost ddost,LOC107673085,LOC107687429 other upstream 2000185 15459862 ~ 15466085 (+)
fam131c fam131c other upstream 2068701 15364390 ~ 15397569 (+)
G132146 LOC106581475 other upstream 2225873 15240080 ~ 15240397 (+)
G132109 szrd1,ca144,LOC103023907,LOC107687433,LOC107716129,LOC107673108,LOC107737539 other upstream 2293373 15168008 ~ 15172897 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other downstream 11724 17479938 ~ 17524353 (+)
snrpg snrpg other downstream 38237 17506451 ~ 17509815 (+)
G133076 NA other downstream 1575280 19043494 ~ 19044186 (+)
LOC103042214 LOC103042214 other downstream 1879254 19347468 ~ 19360891 (+)
G133246 NA other downstream 2655176 20123390 ~ 20124548 (+)

Expression


Co-expression Network