CI01000012_00647774_00648451


Basic Information

Item Value
gene id CI01000012_00647774_00648451
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 647586 ~ 648945 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00647774_00648451.mRNA
ATTTTTTTTGGGGGTAAGATTTTGAGAGGTCATGTGGTGTTTATTCACCAAGAATGTGTTTATCTGTTTAGATTACTTAAATACTATGTTAACTTTAGGGGATTTTCCCATTGAAATTTGTAATTGGTTATTAATGTTGAAAAGCCTGTGATTGGCTGAAAAAGGAAAAGTGCTCCACCTGGTGGTATGCAGGAGACTGCAGGAGAGCTGATGCAGTCATTGTTTTTCGGGGAAATGTGTGATGCCAGTCGCAGTTTTGTAGTAATAATAATAATAATAATAATAATAATAAAACTCTTTATTTGGCTCCCAATTGTTCCTATGCCATGTTTCAGAAAAACCTCTAAACAAACCATGATTTCCTTCGGACATCACAGTTTTGGCGACGAGGATGGGATGTTTTACCGTACAGAAACAGAGTTATGAGTAACTCCGGTGAGGCCTGTGAACAGAGAGCATGTTAAAGAGGGTAACAACGAGCAGAGCCGGGTAGAATGGCTTTTGGAAAGCCCGGGAATTTCCACTTCGATGAAAGTGAGGAACAATTTGATGGCTATTTGGAAAGGCTCAACCAGTATTTTGAAGCAAATGACTTAAAGGACACGAGATACAAGTTCCATGCTAGGAATCAACTGGAAGGCGAATCTATAAGTGAGTACGTCACTAATTTGAGAAAATTGTCAGCCACTTGCAAGTTCGGACAGCTCTTAGATGAAGCTTTGCGCAACAGATTCTTATGTGGGGTAAAAAGTACTGAGTTGAGAGATCGGCTGTTAACTGCTGCACATTCTAAAGACTTAACTCTTGCACTTGGTATAGAGATGGGTCTGGCCTATGAAGTGACTGTAAAGAGCTCACAACAGTTTTCACAAACGACTTTCAAAACACATGTCGTGGACAAAAAAACATCCGTCAGGCCAAAAGAGGCAAATGCAAAACCATGCTACCGATGTACTGGAAAGGGGCACAAACCTGAAGTCTGCATTACAGGATGTAATGCCGTGCATTGAGTAGAAACACACGAGCACAGACATGGAGACTGCAACACACCCCAGCTATAGAAAGATCCTGATACAACGACGGAGCGTCCAGACAGTGTGTTTTGCAGTGAGAGTGCTATAAAAGGGACAGAACTGTTTGCTACTGACTCAAATGTGGATAAAGTAGACAAACCCTATTATGTGTACATCAGAATAAA

Function

NR:

description
Zgc:165409 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00647774_00648451.mRNA True 1198 mRNA 0.41 2 647586 648945

Neighbor

gene id symbol gene type direction distance location
CI01000012_00520655_00552630 NA coding downstream 93766 520139 ~ 553820 (-)
CI01000012_00427641_00472235 NA coding downstream 175009 427573 ~ 472577 (-)
CI01000012_00382850_00384215 NA coding downstream 263160 381711 ~ 384426 (-)
CI01000012_00340814_00363240 HAAO coding downstream 284346 340665 ~ 363240 (-)
CI01000012_00260363_00261340 HCAR1-3 coding downstream 386078 260296 ~ 261508 (-)
CI01000012_00686760_00686993 NA coding upstream 37576 686521 ~ 686993 (-)
CI01000012_00689933_00695237 NA coding upstream 40149 689094 ~ 695264 (-)
CI01000012_00863269_00864644 NA coding upstream 213095 862040 ~ 865072 (-)
CI01000012_00866804_00867133 NA coding upstream 217040 865985 ~ 867133 (-)
CI01000012_00904582_00908136 NA coding upstream 255506 904451 ~ 909518 (-)
G69193 NA non-coding downstream 19901 627342 ~ 627685 (-)
G69157 NA non-coding downstream 64352 582794 ~ 583234 (-)
G69154 NA non-coding downstream 68047 577984 ~ 579539 (-)
G68623 NA non-coding downstream 120280 526939 ~ 527306 (-)
G68644 NA non-coding downstream 129721 517658 ~ 517865 (-)
G69222 NA non-coding upstream 9022 657967 ~ 658208 (-)
G69223 NA non-coding upstream 10232 659177 ~ 659462 (-)
G69224 NA non-coding upstream 12814 661759 ~ 662263 (-)
G69180 NA non-coding upstream 19051 667996 ~ 668238 (-)
G69235 NA non-coding upstream 28063 677008 ~ 677714 (-)
G69161 NA other downstream 59571 587604 ~ 588015 (-)
G69150 NA other downstream 80630 565463 ~ 566956 (-)
CI01000012_00178282_00181473 NA other downstream 467624 178182 ~ 183012 (-)
G69277 NA other upstream 80975 729920 ~ 730465 (-)
G69332 NA other upstream 126419 775364 ~ 775879 (-)
CI01000012_01139864_01192154 TTC7A other upstream 486731 1135676 ~ 1192154 (-)
G69562 NA other upstream 683130 1332075 ~ 1376298 (-)
G70774 NA other upstream 2217563 2866508 ~ 2866892 (-)

Expression


Co-expression Network