CI01000012_00689933_00695237


Basic Information

Item Value
gene id CI01000012_00689933_00695237
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 689094 ~ 695264 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00689933_00695237.mRNA
AGAATATAACCAGACTGAGAGGAAGAGATGAGTGAATCATTAAACATTCAGCAGGAAGACAATGCAGGTAAGCAACAGCACAGTCAGTGTTCAATGGTGATGATAATGATCATTAGCTCATTAGTCTTTTCTGGTTACCAGGTATTATGGCTGAGTCCGGGTGCAGATGGAGATAAGAATGGAGGAAGAGCACAACCCACTGAAGGAGCACGTTCTAGTTCGAAAAATAAGTCCCTCCTTTTTAAAAGCAAAAATATCAAACGGATTCCACGAATAAAAGTCTTTTGTGTCCAAAAACAAGAAAAATTGGAATTCTCCTACCAGTTGATGATTTCTAAGCACAGTTCAAACTGGAAACAGCTTCATGTGGTCGCACCCATTCAGAAATATAATCTTTTTGCTGTATTAAATGTCTTTTCTCTTTATATTAAAGCTTTCTCACGGAGGGTCTCTGAATATCTCTCTAGGCAGCTGCTCCGCCTGACTCGCTCTCTCCCTCTGCTCACGCTGACAGTGCAGCAGCGCCGGCGCAACCTGTGGGCGGGACTTAGCAGCACTTTCATAACATTGGCTCTTAGGAGAGTCAGTCATTGAAAGGAGAACAGTGATTGGACGGAACAGTATTTCTTCTGGAACTTTCCTCCCTTTTTTCCTTTTCTTAGCTTTCTTTAACATAGTTTTTAAATCACACATATAATCCTGAAAATAGTATATGTTTGAAAAAAAAATATATAACTTATATTTGGTGATATTTTAGATGCAAATGTCATGTTGGTTAACACAGACATGTGAAATTGGCTATGTAATGAAAAATGATAAAAAATAGTATGCATTTTATCATATATCATGTTAAAAAGAACACTTGAATTAATAACTTTAAGCTTTGGAAACAGACTTTGGGTCATTTTTTGTCATCTGATCAAATGTTGCGGACCCAAATGGCACCCGTTTCGTAGAATGACTCTTTTAATCTTTTAACTGGTAACCTGATTACCTGGGTTACACATGCTTTGAAGAACAGAAGAATAATAACCATTTCTTTGGTGCACATTTAAACATTGCACAATCAGTGGACATCTTTGAGAGTATATGTGGGCCTGATGTGAACACACACTTTGAAATGAAAGAGTCAAGAGAAACTAGAGAAACAGTCTTGTACCCCACAGAATCAGAAAAAGGCAGTGAGCTTCCCTCTCTTCCTGAGTACCACAGGGATAAGAGAGATTAAAGAAAGACAAATGAACAAGTTGATGAGAGATACAACCAGTGTGTGCTTGGGGTCCATTGTGTTGATAAGCACCTTAGGGAATTACACAGAAGACTGAAGTATCTCAGCACTTCATTTGTCTTGCTGTGATACAGGGTTCAAGTGATGAGCTCAGCAGGACTGGCATTGTTTAGCTGGGCTGGATTTCTAGGTGACAAACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00689933_00695237.mRNA True 1433 mRNA 0.39 3 689094 695264

Neighbor

gene id symbol gene type direction distance location
CI01000012_00686760_00686993 NA coding downstream 2101 686521 ~ 686993 (-)
CI01000012_00647774_00648451 NA coding downstream 40149 647586 ~ 648945 (-)
CI01000012_00520655_00552630 NA coding downstream 135274 520139 ~ 553820 (-)
CI01000012_00427641_00472235 NA coding downstream 216517 427573 ~ 472577 (-)
CI01000012_00382850_00384215 NA coding downstream 304668 381711 ~ 384426 (-)
CI01000012_00863269_00864644 NA coding upstream 166776 862040 ~ 865072 (-)
CI01000012_00866804_00867133 NA coding upstream 170721 865985 ~ 867133 (-)
CI01000012_00904582_00908136 NA coding upstream 209187 904451 ~ 909518 (-)
CI01000012_00955355_00975846 THADA coding upstream 260091 955355 ~ 975880 (-)
CI01000012_01032204_01034843 NA coding upstream 336705 1031969 ~ 1034843 (-)
G69237 NA non-coding downstream 2932 685576 ~ 686162 (-)
G69234 NA non-coding downstream 10619 677919 ~ 678475 (-)
G69235 NA non-coding downstream 11380 677008 ~ 677714 (-)
G69180 NA non-coding downstream 20856 667996 ~ 668238 (-)
G69224 NA non-coding downstream 26831 661759 ~ 662263 (-)
G69262 NA non-coding upstream 21729 716993 ~ 717311 (-)
G69263 NA non-coding upstream 22666 717930 ~ 718195 (-)
G69264 NA non-coding upstream 23227 718491 ~ 718767 (-)
G69265 NA non-coding upstream 23630 718894 ~ 719184 (-)
G69291 NA non-coding upstream 55434 750698 ~ 750997 (-)
G69161 NA other downstream 101079 587604 ~ 588015 (-)
G69150 NA other downstream 122138 565463 ~ 566956 (-)
CI01000012_00178282_00181473 NA other downstream 509132 178182 ~ 183012 (-)
G69277 NA other upstream 34656 729920 ~ 730465 (-)
G69332 NA other upstream 80100 775364 ~ 775879 (-)
CI01000012_01139864_01192154 TTC7A other upstream 440412 1135676 ~ 1192154 (-)
G69562 NA other upstream 636811 1332075 ~ 1376298 (-)
G70774 NA other upstream 2171244 2866508 ~ 2866892 (-)

Expression


Co-expression Network