CI01000012_00863269_00864644


Basic Information

Item Value
gene id CI01000012_00863269_00864644
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 862040 ~ 865072 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00863269_00864644.mRNA
AGTGCTGTAAAAAGAGCGTGTGCACTGCATGAGGGGTGCAGAAAGCGACCAATGAGATCCTGAGGCCTGGCTACACTTGAAAAGCAGGGCGTAACTTTGAGGCAACTTTCGCAGTAAGTTTGAGAGCTCCTCCTCTTTACGCGCTGTCCTCAAGCTTATATGTGCGGGATAGTAAAGCAGACTCTTTACTGTTCTAGTTCGGCACTGTGGGAGAAGACTTAACAACAAAAACACGCAACTAGGAACTCAGCCTTCCTTCTCCGAGTTTCAGACCACATCTGAGACTAACATATTTTTTTTTGTATTATTCCGTATCTCTTGCACAATCCCAGAGCCAGTGACAAACTATAAGCCTTTGCATCCAAAGGATCCAGGTCGGTCTTCAAATGAGAGATCATCTGCGACTATCTTCTTCCGAAGAAACAGAAATGTCTGCAACCATCCTATCCACTTTCTACGACATCGACATGCTGTACAAGGAGAAGAGCCTCAACATGAACGCCATTCACATTAACAGCATGCTGGATAAGAAAGCAGTCGGGGCCCCGGTAACAACCTCCAGCAGCAGCAGTTGCACCAACAACTGCAACTCGTACGCGTCAGGATTCTTCCGTCGAAACTCCGCCAGCAACATGGAGTCCATGACGAACGGCAACAAGTACCCCGCCAGTTCTTACAGCAACATGAAGGAGAACGCCATAATGAATAAGGAGAACAAGTTTCGCGACCGCGCCTACAGCGAGAACGGCGAGCGCAGCCAGCAACAGCTGCAAGTCCTGCAGCAGAAACCGGGCTCGCAGATCAACTCCACCCGCTACAAGACGGAGCTCTGCAGGCCATTCGAGGAAAACGGCGCGTGTAAATACGGCGAAAAGTGTCAGTTCGCGCACGGCTACCACGAGCTGAGAAGCCTGTCTCGCCACCCAAAATACAAAACCGAGCCCTGTCGCACTTTCCACACCATCGGCTTCTGTCCGTATGGCCCGCGCTGCCACTTCATCCATAATGCCGACGAACGCAGACCAGCGCCCACCAACACCAACAGCATGCATGTAGAGTCCACCAAGCCCGCCAGGGGAGAGCCGGTGTGCGGCTACGGGCAGCACCAGCAGGCGGCGGGAGCCTTCAGGGACCGACCAAAACTCCACCACAGCCTTAGCTTCTCGGGTTTCTCCAGCCACCACGAACTCGACTCGCCCCTTCTCGAAAGCCCCACGTCCCGCACTCCCCCACCGCCTTCTTCCAATAGTTCCCCCAGCGCCACTAACTTCTACGAAGACGTTCTCTCGTCGAGTCGTTGCCTTGGGAACAGTGCCTTCTCTTTCCCCGGCCAAGACCTCAAAACCCTGCTCGCGCCGCTGGCCGTGCACACGCACAACGGTTACTATGGGAACCTTCAGGTCAACATGGGCGACGGCCTCGGCCACTTGCAGTCCCTCCACCGCCTGTCGGAGTCGCCGGTGTTCGACTCGCCCCCCAGCCCGCCTGACAGCATCTCGGACCGGGAGAGCTACGCTAGCGGCTCGCTCAGCTCCTCTGGAAGTCTCAGCGGCTCTGAGTCTCCCAGTCTGGACGGCGGGAGACGTTTGCCAATCTTCAGCAGGCTGTCGATTTCCGATGATTAATCCGCTTTTATAGTGAATTGTGGTGGATTTTTTTCTCTCTCTCGCGACCCTCCCGATAGATATGCAATTCAGCAAAAGACTTTAATATCGAGGGAGATGGATTTGTTTGTCAGACGGTTGACATGGCATTAGTCTGTATGAACTGCTTGAAGGCATTCCACCGGTGCAGTTTGTTGCATTCTCTTGGTCTTTTTGGACCAACTACTTTCCAGATTTGTACAAAAGACTTGTTTTTGAACGTGAAAGACAGAGCGGTTTCAGATTTTCCTTCTTCCTTGCCAAGAATATGCCTTGACAAAAAGTATACTAGTTTTGAAAGTATGTACTTCCATTCCAAAAGTTTATCCAGTTTCGCGGCGCCACCCAGTGGTTTGGTTGGTTTGTGCAGTTTGAAACTTTCGTTTGGCTTGTTGGGAAATCACTGCTGATGGTTGAATATATCTATTTTTTTTTTTTAGCTGATTTGTGTGATTTACATAGCAGTGCATAACTGGCTATGAACTATTTAACTTATTTATTTTATCTTGTGAAAAGTATAGGCTACATTGTTAATTGTGTCCATACTGTATTTATCGAGTATGATGAAGCAATAGATCTATATTCTTTTATGTTTAAATTAAGATCGCCATTATTAATCTACATAAAGTGGAGTGTATGTTCTTTTCACAGTAATATATATTTTTGTTTGGTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAACTTCTTTATTTTATTGTAAATGAGTAAAAAAAAAAAAATCTTAATTTAAGAGATTGTATGTGATATTTATTTCATTCATTTTGTTTCCTTGTTTACGTTCATTAAAAAAAAAAGTTTGTGTGATTTGCTTGTTTGTTGGGATGTTACTTTTCGGAAGGGTTTGTTTGTTTTTGTTTTGGAGAATCGTTAGACGTGTCCCTTTTAGGTAGGTATGTACGTAGAATGTATAAACTGTTTGGACCGTCCAAACGTGTACTAGCCTTAGATTTTCATTAAAATCAGATTTCAAAGATCCCAAGTACATTGGTTAACCAAAAAGTATTTTTTTTTTTTAAATTTTATATATATAATTATACACACATACATATACACGTGTATGTAAAATGCACGACAGCCACGTGCGTGAGAATGTAGCAGTCAAGTGCCCCAGTATTACTGCCTAGTGCCTGTGGGGATTCACCATCTTACATTGCCTTATGATTAACCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00863269_00864644.mRNA True 2854 mRNA 0.46 2 862040 865072

Neighbor

gene id symbol gene type direction distance location
CI01000012_00689933_00695237 NA coding downstream 166776 689094 ~ 695264 (-)
CI01000012_00686760_00686993 NA coding downstream 175047 686521 ~ 686993 (-)
CI01000012_00647774_00648451 NA coding downstream 213095 647586 ~ 648945 (-)
CI01000012_00520655_00552630 NA coding downstream 308220 520139 ~ 553820 (-)
CI01000012_00427641_00472235 NA coding downstream 389463 427573 ~ 472577 (-)
CI01000012_00866804_00867133 NA coding upstream 913 865985 ~ 867133 (-)
CI01000012_00904582_00908136 NA coding upstream 39379 904451 ~ 909518 (-)
CI01000012_00955355_00975846 THADA coding upstream 90283 955355 ~ 975880 (-)
CI01000012_01032204_01034843 NA coding upstream 166897 1031969 ~ 1034843 (-)
CI01000012_01139864_01192154 TTC7A coding upstream 273681 1135676 ~ 1192154 (-)
G69360 NA non-coding downstream 55253 806510 ~ 806787 (-)
G69357 NA non-coding downstream 58900 802919 ~ 803140 (-)
G69342 NA non-coding downstream 72640 789053 ~ 789400 (-)
G69341 NA non-coding downstream 74323 787496 ~ 787717 (-)
G69334 NA non-coding downstream 82165 779646 ~ 779875 (-)
G69444 NA non-coding upstream 207896 1072968 ~ 1073173 (-)
G69314 NA non-coding upstream 251830 1116902 ~ 1118110 (-)
G69497 NA non-coding upstream 339237 1204309 ~ 1204539 (-)
G69498 NA non-coding upstream 340103 1205175 ~ 1205413 (-)
G69508 NA non-coding upstream 351364 1216436 ~ 1216672 (-)
G69332 NA other downstream 86161 775364 ~ 775879 (-)
G69277 NA other downstream 131575 729920 ~ 730465 (-)
G69161 NA other downstream 274025 587604 ~ 588015 (-)
G69150 NA other downstream 295084 565463 ~ 566956 (-)
CI01000012_00178282_00181473 NA other downstream 682078 178182 ~ 183012 (-)
G69562 NA other upstream 467003 1332075 ~ 1376298 (-)
G70774 NA other upstream 2001436 2866508 ~ 2866892 (-)
G71898 NA other upstream 3668458 4533530 ~ 4534672 (-)
G72068 NA other upstream 3911148 4776220 ~ 4780132 (-)

Expression


Co-expression Network