G132837


Basic Information

Item Value
gene id G132837
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 18137952 ~ 18139522 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU179649
ttacacgatgcttagtaagacaacaagtcttatcagagaagaaaaaaaatttagaaaaagtcacttgctaagatttagttttttgcagtgagtCATGTGATTTTGTTGTGCCCACTTTGTAAGGGactgaaatgtattattttttttctggtggtCAGTGGTGAAATATGGCTAAAATTAGCATGGCTAGCAAATTAGCAAGAAAAAACAGCTACCTCAAAATGGTAATAGTACATAGAATAGTGTTTGAGTTTACTGACAAGGTAACACAAAACAAACTCAAACtacctagcttagcttagctacctagctaacaCATTAGCACTCATTCCACcagtaaataaattacaaatataGCATATCGTACAATATACAAATAGTATATCAGCTCTTTTTTTGAAAACTGCTTGTTATACAGGTATTTTATTAGCTTAGCTACCCAGCTAACAAATTAGCTACACATTCCAAGAGCAGAGAACTCACAAATATAGcatATCTCCTGTTTATTAAAAAGGCTAACCATAAGGCTATTTATTAGCCAGAGCTAGCTACAGTGTTTAGCACTGGGGGTTTTTAACAGGTTTagcacaacacaatacaaaGCACAGAAACTGAGGGAGGAGGAAATATGGgattataatttgtaatcttgTTAAAATGTTATACTTGTGAAACTAGCACTAATTTGTTAGCTACCCTTgtgaaaaagaagtatacttaagttattttgtatgttattttggaaaccaataatttgtatttgtatttcatATTGAGTATACTAGTTGTATGTTATTATCGCATCTATTTAATATAGTTTAAGTATAATTGTGTGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179649 True 838 lncRNA 0.32 2 18137952 18139522

Neighbor

gene id symbol gene type direction distance location
wdr63 NA coding upstream 12016 18077650 ~ 18125936 (+)
LOC103026658 LOC108425505,LOC107715025,LOC107671876,LOC106572368,LOC105022778 coding upstream 115955 17804083 ~ 18021997 (+)
LOC103044854 LOC103044854,LOC108425484 coding upstream 405431 17630771 ~ 17732521 (+)
sars sars,LOC107671868,LOC107697960 coding upstream 510363 17601124 ~ 17627589 (+)
LOC103023305 NA coding upstream 548227 17564407 ~ 17589725 (+)
LOC111194038 NA coding downstream 74363 18213885 ~ 18214673 (+)
cyr61 cyr61,cef10 coding downstream 223193 18362715 ~ 18365465 (+)
LOC103024383 LOC108441536,LOC108275807,LOC107550164,LOC107694430,LOC105904845 coding downstream 599536 18739058 ~ 18768420 (+)
LOC103025011 abce1,LOC108441533,LOC108275804,LOC107653221 coding downstream 693827 18833349 ~ 18853525 (+)
LOC103025641 NA coding downstream 775863 18915385 ~ 18923002 (+)
G132818 NA non-coding upstream 23394 18062628 ~ 18114558 (+)
G132814 NA non-coding upstream 82938 18054671 ~ 18055014 (+)
G132813 NA non-coding upstream 83977 18053409 ~ 18053975 (+)
G132806 NA non-coding upstream 105604 18031938 ~ 18032348 (+)
G132774 NA non-coding upstream 117809 18016022 ~ 18020143 (+)
G132844 NA non-coding downstream 45855 18185377 ~ 18197642 (+)
G132846 NA non-coding downstream 97489 18237011 ~ 18238036 (+)
G132856 ddah1 non-coding downstream 102130 18241652 ~ 18255002 (+)
G132858 NA non-coding downstream 108394 18247916 ~ 18248713 (+)
G132861 NA non-coding downstream 143928 18283450 ~ 18284828 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other upstream 613599 17479938 ~ 17524353 (+)
snrpg snrpg other upstream 628137 17506451 ~ 17509815 (+)
LOC103031494 NA other upstream 2400171 15730897 ~ 15737781 (+)
ddost ddost,LOC107673085,LOC107687429 other upstream 2671867 15459862 ~ 15466085 (+)
fam131c fam131c other upstream 2740383 15364390 ~ 15397569 (+)
G133076 NA other downstream 903972 19043494 ~ 19044186 (+)
LOC103042214 LOC103042214 other downstream 1207946 19347468 ~ 19360891 (+)
G133246 NA other downstream 1983868 20123390 ~ 20124548 (+)
LOC103029397 ndrg3,LOC103029397,LOC107724194,LOC107705728,LOC107696989,LOC107693556,LOC108429301 other downstream 2153641 20293163 ~ 20495831 (+)
tcea2 tcea2 other downstream 2627394 20766916 ~ 20783861 (+)

Expression


Co-expression Network