G132846


Basic Information

Item Value
gene id G132846
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 18237011 ~ 18238036 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU179658
GGTCTTCCAGTGGCTGTTTTCAATGGATTGTGAACATTGATTAGAagttacacacatacacacacaaacactgctgGGTTTTCCAGTTCCAGCCCTAAAGGCCGAAGAGTGCCCCTTGAGCTAAACCTTGCTAGGTTTGTTGATGAGAACGGAACAGCAGGTCAGACATCCGTCCACCTTCCTCTTCTCGTCGTTGTGGACAGGGATCAGCATGTGGTCCTTCAGCTTCTCAAACA

Function

GO:

id name namespace
GO:0022857 transmembrane transporter activity molecular_function
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179658 True 236 lncRNA 0.48 2 18237011 18238036

Neighbor

gene id symbol gene type direction distance location
LOC111194038 NA coding upstream 22338 18213885 ~ 18214673 (+)
wdr63 NA coding upstream 111075 18077650 ~ 18125936 (+)
LOC103026658 LOC108425505,LOC107715025,LOC107671876,LOC106572368,LOC105022778 coding upstream 215014 17804083 ~ 18021997 (+)
LOC103044854 LOC103044854,LOC108425484 coding upstream 504490 17630771 ~ 17732521 (+)
sars sars,LOC107671868,LOC107697960 coding upstream 609422 17601124 ~ 17627589 (+)
cyr61 cyr61,cef10 coding downstream 124679 18362715 ~ 18365465 (+)
LOC103024383 LOC108441536,LOC108275807,LOC107550164,LOC107694430,LOC105904845 coding downstream 501022 18739058 ~ 18768420 (+)
LOC103025011 abce1,LOC108441533,LOC108275804,LOC107653221 coding downstream 595313 18833349 ~ 18853525 (+)
LOC103025641 NA coding downstream 677349 18915385 ~ 18923002 (+)
LOC103025945 NA coding downstream 716653 18954689 ~ 18962846 (+)
G132844 NA non-coding upstream 39369 18185377 ~ 18197642 (+)
G132837 NA non-coding upstream 97489 18137952 ~ 18139522 (+)
G132818 NA non-coding upstream 122453 18062628 ~ 18114558 (+)
G132814 NA non-coding upstream 181997 18054671 ~ 18055014 (+)
G132813 NA non-coding upstream 183036 18053409 ~ 18053975 (+)
G132856 ddah1 non-coding downstream 3616 18241652 ~ 18255002 (+)
G132858 NA non-coding downstream 9880 18247916 ~ 18248713 (+)
G132861 NA non-coding downstream 45414 18283450 ~ 18284828 (+)
G132867 NA non-coding downstream 107468 18345504 ~ 18348742 (+)
LOC111194096 NA non-coding downstream 107811 18345847 ~ 18353348 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other upstream 712658 17479938 ~ 17524353 (+)
snrpg snrpg other upstream 727196 17506451 ~ 17509815 (+)
LOC103031494 NA other upstream 2499230 15730897 ~ 15737781 (+)
ddost ddost,LOC107673085,LOC107687429 other upstream 2770926 15459862 ~ 15466085 (+)
fam131c fam131c other upstream 2839442 15364390 ~ 15397569 (+)
G133076 NA other downstream 805458 19043494 ~ 19044186 (+)
LOC103042214 LOC103042214 other downstream 1109432 19347468 ~ 19360891 (+)
G133246 NA other downstream 1885354 20123390 ~ 20124548 (+)
LOC103029397 ndrg3,LOC103029397,LOC107724194,LOC107705728,LOC107696989,LOC107693556,LOC108429301 other downstream 2055127 20293163 ~ 20495831 (+)
tcea2 tcea2 other downstream 2528880 20766916 ~ 20783861 (+)

Expression


Co-expression Network