G132996


Basic Information

Item Value
gene id G132996
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 18776122 ~ 18776723 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU179842
attagaaacatttttaacattattatttaactgccaatactgacagtatattgCTGGGGCAGAATaagagtaaactcagtaaagagtgaactctgtagctcaaagccagcatactgtgatcactacaaacacaacaaagttaatgtgctcttacagcctacaacactgaggcctggcaaccaacacatatattatattactgcacgcccaggatcaggtagctttgtacaacagacaacacaaagatggtaagtaagggagagaccacacccaatatgcaaatattggcctggcaatcaacgtatatattataattagtgCACGCCCagaataaggtagctttgggcaacagacaacacaaagatggtaagtaagggagcggctacacccaatatgcagatatatggtaccaggaaccaataggaaagctgcatgaaccaacactgtagaaagagctaaaagttggttgaaatcacattttttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179842 True 484 lncRNA 0.40 2 18776122 18776723

Neighbor

gene id symbol gene type direction distance location
LOC103024383 LOC108441536,LOC108275807,LOC107550164,LOC107694430,LOC105904845 coding upstream 7702 18739058 ~ 18768420 (+)
cyr61 cyr61,cef10 coding upstream 410657 18362715 ~ 18365465 (+)
LOC111194038 NA coding upstream 561449 18213885 ~ 18214673 (+)
wdr63 NA coding upstream 650186 18077650 ~ 18125936 (+)
LOC103026658 LOC108425505,LOC107715025,LOC107671876,LOC106572368,LOC105022778 coding upstream 754125 17804083 ~ 18021997 (+)
LOC103025011 abce1,LOC108441533,LOC108275804,LOC107653221 coding downstream 56626 18833349 ~ 18853525 (+)
LOC103025641 NA coding downstream 138662 18915385 ~ 18923002 (+)
LOC103025945 NA coding downstream 177966 18954689 ~ 18962846 (+)
LOC103045888 cntn3a.1,LOC108438208,LOC107696975,LOC107663068,LOC107705712,LOC107551535 coding downstream 258720 19035443 ~ 19195367 (+)
ttll9 ttll9 coding downstream 605589 19382312 ~ 19393378 (+)
G132994 NA non-coding upstream 2517 18772391 ~ 18773605 (+)
G132983 NA non-coding upstream 60121 18711740 ~ 18716001 (+)
G132981 NA non-coding upstream 73938 18655259 ~ 18702184 (+)
G132948 NA non-coding upstream 133372 18642219 ~ 18642750 (+)
G132946 NA non-coding upstream 151820 18623572 ~ 18624302 (+)
G133042 NA non-coding downstream 99956 18876679 ~ 18952450 (+)
G133046 NA non-coding downstream 114096 18890819 ~ 18908346 (+)
G133047 LOC103482394 non-coding downstream 115199 18891922 ~ 18907238 (+)
G133055 NA non-coding downstream 149259 18925982 ~ 18931169 (+)
G133066 NA non-coding downstream 175302 18952025 ~ 18968519 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other upstream 1251769 17479938 ~ 17524353 (+)
snrpg snrpg other upstream 1266307 17506451 ~ 17509815 (+)
LOC103031494 NA other upstream 3038341 15730897 ~ 15737781 (+)
ddost ddost,LOC107673085,LOC107687429 other upstream 3310037 15459862 ~ 15466085 (+)
fam131c fam131c other upstream 3378553 15364390 ~ 15397569 (+)
G133076 NA other downstream 266771 19043494 ~ 19044186 (+)
LOC103042214 LOC103042214 other downstream 570745 19347468 ~ 19360891 (+)
G133246 NA other downstream 1346667 20123390 ~ 20124548 (+)
LOC103029397 ndrg3,LOC103029397,LOC107724194,LOC107705728,LOC107696989,LOC107693556,LOC108429301 other downstream 1516440 20293163 ~ 20495831 (+)
tcea2 tcea2 other downstream 1990193 20766916 ~ 20783861 (+)

Expression


Co-expression Network