CI01000012_00904582_00908136


Basic Information

Item Value
gene id CI01000012_00904582_00908136
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 904451 ~ 909518 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00904582_00908136.mRNA
ACTGGCCACAGGGTCCCCACGGGTCCTTAAAAAGTCTTAAATTCAGTTTGATCAAATTTAAGGCCATTAAAATTCTAAATTATCTTAAATGTTAAGAGGTCTTAAATTTGGGGATGGAAAAGCAATAATCGCGATATGGCGTTATGAGATTATTAACCTTCAAAAGGCAATGATTTAAATAAATGTTAGTGCTGCACATTCAACATCCAAATGCAGTGCTGTTGAGCATCATAAAGATTCGCTGTTTCAGAGCAGTGTGCAATCAATAAATACTGTGCATTTTTGCCAAGCGATTGCTTATGATCCACTGTTTATGAAATATGATAATGTTTGCTTTATGGTTTTTATATTGTAATATGTTGTAAATAGTTGTTTTATCTGGCTCATCTGAATGAGTAGCTGGAAGTAGTAAAGCAAAGACATTTCAAAATAAGAGTCCTGGTGTATTTTGGACTTGTTTATAATTAAAAGTCCCGCATTATGCATATAATCTTTTATTTTTTTGGTAATAGTAACAATAATAAACTGTATCTGGATGTTAAACTCTTGTATTTTCTCTCTGGGCTGCCCCATCATAGGAAGGAAAACTAAGAATATTATTTAATGCATTCAGTATAAGGATTTAACTAGTATCAACACAATACATTCACCCCCCGGTTTCACAGACAAGGCTTAAGCGTAGTCTCAGGCTTAAATAGATTTTTGAGCTGTTTTAACTGAAAGCACTGATATGTCTTAAAATATGTCAGTACCATTGTTTTTTCTCAAGATTCACACCAGTAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCAAGGCATGTTTATAAAAGCTACTTAAATGTCCTAATTGAACTAAGGCCTAATCCTGGCTTAATCTAAACCCTGTCTGTGAAACCGGGCTTTATTATTATTATTTCCCTTCTTTAATCACATTGTCAGCAAAATCCAACAGTGATCAACCTCTAAATTGTACGTATTGATATACTGCATAAATTAGTTTCAGTACACATGTACATGACTTATTTTGAGATTGTATGGGTTTGCTCAGTATGTTGTGCAGTACAGTTTTTTTTTTTTTTTTTTTTTGTATGTTTGTTTGTTTGTTTTGATACTTCAATGGTGTATTTGCTTCCAATAAAAAATGTACATTATTCAGGTTTGGAATGACATCAGGTTGAGTTAATGATTTTTTTGGTGAAATATTACTTTCATTTGTAAAAGAAAAGGTGAACACAACAGGTTAGGCTGGTTTTGTTTTGTTTTGTGTGTATCGTATATTTGCAGCCACAAATGAGTCTGTGCTTCCGTCATGTGACAAGCCGTGTCTGTGGATTGTTGTCCTGCTGTGACTGCTGAAGGCAACATGTATGTCATGGGGGTTAATGTGGATGTCTGTATGATGGTGCAATTTAAACCCAGCAGGTGTGGTCGCTCAGCAGTGTACCGCACACGTGAAATGGCAGCGAGAGCCCTGGTTCCTTTTGTTCTGGTGACCCAAGTTCCCTCCACTATCCAAACTCTACTGGAGGAGCTGCCTGAAGAACCTGGACCAGGAATCCAACAAAACCACATACATGGAACATTGCTTCAGGTGTGTGAATACTCCTTAATCACATGCTCTGTACAGCAATCAATTACGTTGTGTTACATTACATACGCAGCATCTACAAGAGTATAAATATTTGAGGGAAATATATATATATTTAAATCCATTTTAAATGATTTGTTATAAATTAGCTTTAAATTATCGAATATGCCATTTTCTGAAAGATGCTGATACCTGAATTATTCCCCTTTTAAACGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00904582_00908136.mRNA True 1828 mRNA 0.34 2 904451 909518

Neighbor

gene id symbol gene type direction distance location
CI01000012_00866804_00867133 NA coding downstream 37318 865985 ~ 867133 (-)
CI01000012_00863269_00864644 NA coding downstream 39379 862040 ~ 865072 (-)
CI01000012_00689933_00695237 NA coding downstream 209187 689094 ~ 695264 (-)
CI01000012_00686760_00686993 NA coding downstream 217458 686521 ~ 686993 (-)
CI01000012_00647774_00648451 NA coding downstream 255506 647586 ~ 648945 (-)
CI01000012_00955355_00975846 THADA coding upstream 45837 955355 ~ 975880 (-)
CI01000012_01032204_01034843 NA coding upstream 122451 1031969 ~ 1034843 (-)
CI01000012_01139864_01192154 TTC7A coding upstream 229235 1135676 ~ 1192154 (-)
CI01000012_01203854_01208893 NA coding upstream 293934 1203452 ~ 1208893 (-)
CI01000012_01240945_01242653 SOCS5, SOCS5B coding upstream 330999 1240517 ~ 1242653 (-)
G69360 NA non-coding downstream 97664 806510 ~ 806787 (-)
G69357 NA non-coding downstream 101311 802919 ~ 803140 (-)
G69342 NA non-coding downstream 115051 789053 ~ 789400 (-)
G69341 NA non-coding downstream 116734 787496 ~ 787717 (-)
G69334 NA non-coding downstream 124576 779646 ~ 779875 (-)
G69444 NA non-coding upstream 163450 1072968 ~ 1073173 (-)
G69314 NA non-coding upstream 207384 1116902 ~ 1118110 (-)
G69497 NA non-coding upstream 294791 1204309 ~ 1204539 (-)
G69498 NA non-coding upstream 295657 1205175 ~ 1205413 (-)
G69508 NA non-coding upstream 306918 1216436 ~ 1216672 (-)
G69332 NA other downstream 128572 775364 ~ 775879 (-)
G69277 NA other downstream 173986 729920 ~ 730465 (-)
G69161 NA other downstream 316436 587604 ~ 588015 (-)
G69150 NA other downstream 337495 565463 ~ 566956 (-)
CI01000012_00178282_00181473 NA other downstream 724489 178182 ~ 183012 (-)
G69562 NA other upstream 422557 1332075 ~ 1376298 (-)
G70774 NA other upstream 1956990 2866508 ~ 2866892 (-)
G71898 NA other upstream 3624012 4533530 ~ 4534672 (-)
G72068 NA other upstream 3866702 4776220 ~ 4780132 (-)

Expression


Co-expression Network