G133076


Basic Information

Item Value
gene id G133076
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 19043494 ~ 19044186 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU179969
TGCTCGTTCGTAGTTGGCTCGATTTCCTGCTCGTAGGATCCATGTTGGTTTGTATTGCTCTCTGTTCTGTCGCTGGCGTTTTGGTTGGATCCTCGCTGTGTTTGCTGTTGGCGGTCTGGGTTCCTGTTTTGCTGGATCACGTGACCGTGTCGTGCTTGCCTTCGAGGCTTGCTGCTCCGATGCTTTGTCTCGGCTCGCAGCCGTGTGCTGAATCGTGCTGGTTGTTTCGGCTCAGTGTCGATTCTGTGGCGTTCTGGTCTAGTGCTGAGGCTTTTCTCGGCGGTGTTCGGATAGTTGCTTGGTGTTTCTGCGTTTTCCACGGCTCTGTCCGGTGCCTGTGGCTGAGTTTGTACGCTTCGCTCGAGCAGTCTGGGCTGGATGGCTGTTTTTAAACCCGCTCCTGCTGGCACCCGATAGTTTTAGCCCCGCGCCCGCCCTCCGTTTTTTACGTTTCTGCCGCTCCGCACGCCTGCTTGTGTTGCTTACGTTTAGTGCTCGACATTAACTTGGGTTTTGCTCCCTTCCTACTGTCCACACAAACACGCCCACGCCTCGGTGGAGCTGACCCTTCAGGCACTGCTTGCACAGTGTTTCGTTCATGCAGCACCAAAACCTAATTTGATCGATGATAAATAAACTTAGTGTACTTGGTTCATCCTCG

Function

GO: NA

KEGG:

id description
ko00100 Steroid biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU179969 True 661 TUCP 0.54 2 19043494 19044186

Neighbor

gene id symbol gene type direction distance location
LOC103025945 NA coding upstream 80648 18954689 ~ 18962846 (+)
LOC103025641 NA coding upstream 120492 18915385 ~ 18923002 (+)
LOC103025011 abce1,LOC108441533,LOC108275804,LOC107653221 coding upstream 189969 18833349 ~ 18853525 (+)
LOC103024383 LOC108441536,LOC108275807,LOC107550164,LOC107694430,LOC105904845 coding upstream 275074 18739058 ~ 18768420 (+)
cyr61 cyr61,cef10 coding upstream 678029 18362715 ~ 18365465 (+)
ttll9 ttll9 coding downstream 338126 19382312 ~ 19393378 (+)
LOC103042623 LOC103042623,LOC108438215 coding downstream 353989 19398175 ~ 19400544 (+)
sycp2 NA coding downstream 357669 19401855 ~ 19427830 (+)
LOC103040552 sulf2,sulf2b,LOC108429304,LOC107693554,LOC107724188,LOC107705722 coding downstream 864538 19908724 ~ 20132876 (+)
LOC103028561 LOC108429303 coding downstream 1091347 20135533 ~ 20245691 (+)
G133043 NA non-coding upstream 55723 18976404 ~ 18987771 (+)
G133066 NA non-coding upstream 74975 18952025 ~ 18968519 (+)
G133042 NA non-coding upstream 91044 18876679 ~ 18952450 (+)
G133055 NA non-coding upstream 112325 18925982 ~ 18931169 (+)
G133046 NA non-coding upstream 135148 18890819 ~ 18908346 (+)
G133077 NA non-coding downstream 63 19044249 ~ 19045514 (+)
G133079 NA non-coding downstream 1804 19045990 ~ 19047682 (+)
G133154 NA non-coding downstream 276872 19321058 ~ 19321314 (+)
G133220 NA non-coding downstream 852311 19896497 ~ 19896705 (+)
G133223 NA non-coding downstream 859547 19903733 ~ 19904036 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other upstream 1519141 17479938 ~ 17524353 (+)
snrpg snrpg other upstream 1533679 17506451 ~ 17509815 (+)
LOC103031494 NA other upstream 3305713 15730897 ~ 15737781 (+)
ddost ddost,LOC107673085,LOC107687429 other upstream 3577409 15459862 ~ 15466085 (+)
fam131c fam131c other upstream 3645925 15364390 ~ 15397569 (+)
LOC103042214 LOC103042214 other downstream 303282 19347468 ~ 19360891 (+)
G133246 NA other downstream 1079204 20123390 ~ 20124548 (+)
LOC103029397 ndrg3,LOC103029397,LOC107724194,LOC107705728,LOC107696989,LOC107693556,LOC108429301 other downstream 1248977 20293163 ~ 20495831 (+)
tcea2 tcea2 other downstream 1722730 20766916 ~ 20783861 (+)
G133501 NA other downstream 1964557 21008743 ~ 21015058 (+)

Expression


Co-expression Network