CI01000012_00979848_00986445


Basic Information

Item Value
gene id CI01000012_00979848_00986445
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 979848 ~ 986745 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00979848_00986445.mRNA
GGCCTGAGGGGTGACGGCATGGCGGAGGGTGATGAATGCGCGGGCGGGGAGTGGAAAGAGAAGTACATGGCCCTCGAGGCCCTGCTCTTCAAGTTCCGTGGGCAGATGAGTGTGATCCGAGAGCTCACGGCAGAAAAGGACACAGATGAGTGGAGTATGGAGCACAGGCCGGGTTACGCTTGGGAATTTGGAGCTGTGGTGTAGTGAGGGGTGTCATACAGACAGGCTTTGTGAGCTGGCCTGTGGAGGAGGCTGGATGAGGGGTGCAGGGCGGGCCGGCCACAGAAGGCCGTGGATGGAATGCATGGAATGGAAGACAGACTCTAGCCATGGCCATATGGGGCGGAGAAGCAAAGAGGGCTTGTTGTAGATTAAAAAAAAACTATTGATAGAAATGTGGATTTTACAGGTGCAAACTGATGACAGCATCCATAGAGGTTTTTGGTTTGTTTTGGTATAATGCTCTCCCATTAGCAGTCGCCCATCACATCAATACTCATTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00979848_00986445.mRNA True 504 mRNA 0.53 2 979848 986745

Neighbor

gene id symbol gene type direction distance location
CI01000012_00886127_00889703 NA coding upstream 89511 885120 ~ 890337 (+)
CI01000012_00644021_00646785 NA coding upstream 332773 644021 ~ 647075 (+)
CI01000012_00593086_00594741 NA coding upstream 384383 592126 ~ 595465 (+)
CI01000012_00502185_00516358 NA coding upstream 462940 500151 ~ 516908 (+)
CI01000012_00318129_00318595 NA coding upstream 660430 318129 ~ 319418 (+)
CI01000012_00991831_01027918 NA coding downstream 4430 991175 ~ 1028035 (+)
CI01000012_01054663_01055748 NA coding downstream 67918 1054663 ~ 1058353 (+)
CI01000012_01060250_01062758 NA coding downstream 73440 1060185 ~ 1062758 (+)
CI01000012_01080380_01085038 NA coding downstream 93635 1080380 ~ 1085347 (+)
CI01000012_01088839_01099989 NA coding downstream 102094 1088839 ~ 1099989 (+)
G68919 NA non-coding upstream 4221 975071 ~ 975627 (+)
G68811 NA non-coding upstream 164984 814645 ~ 814864 (+)
G68804 NA non-coding upstream 174644 803834 ~ 805204 (+)
G68795 NA non-coding upstream 181426 798165 ~ 798422 (+)
G68771 NA non-coding upstream 204033 775180 ~ 775815 (+)
G68940 NA non-coding downstream 87240 1073985 ~ 1074235 (+)
G68972 NA non-coding downstream 197351 1184096 ~ 1191354 (+)
G68978 NA non-coding downstream 209062 1195807 ~ 1196018 (+)
G68980 NA non-coding downstream 219399 1206144 ~ 1207565 (+)
G68985 NA non-coding downstream 228490 1215235 ~ 1215506 (+)
G68725 NA other upstream 294992 683523 ~ 684856 (+)
G68660 NA other upstream 443895 535566 ~ 535953 (+)
CI01000012_00194370_00195347 HCAR1-3 other upstream 774074 193903 ~ 195676 (+)
G68282 NA other upstream 919316 26390 ~ 60532 (+)
G70029 NA other downstream 1635733 2622478 ~ 2631385 (+)
CI01000012_04424569_04425090 NA other downstream 3433494 4424569 ~ 4425756 (+)
CI01000012_04495631_04501066 NA other downstream 3511708 4495631 ~ 4501066 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 4190150 5176895 ~ 5180970 (+)

Expression


Co-expression Network