G133502


Basic Information

Item Value
gene id G133502
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 21009907 ~ 21015916 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU180543
TGTGGGCGTTCTGAGGCCCGCCTCCCCGCCTTCCTTGATTCAGGAGCAGCAGGCAACTTTCTAGATGCCACCTTGGCCAGAAGGCTCGCCTTGCCGCTAGTACCCCTAGGGAAGCCCTTACCAATAGCGGCGATCGACGGGCGCTCCCTGGAGCCAGGGGAGGTAACTCACCAAACACGCCCTGTCATGCTGCGAGTCGGGTCACACTCTGAGCAGATCACACTGTATGTTATCAGTGCTCCCGATTTGCAGCTGATCTTGGGCTTTCCTTGGCTCCAGAGACATAACCCCCATGTTGACTGGCTGTCCCGTTCGGTGGTAGCATGGGGGTCAGCCTGTCGATCGTCCTGCCTCCAACCTCCCAGGGCTTCCAAGGGTGCGGACCCTGATTCCAGGGGCCCTGACCCTTCCCGGGTACCCTCTGATTACCTAGACCTCCGGGAGGTCTTTAGTAAGCAGAAGGCCCAAATCCTGCCCCCCCATCGCCCCTGCGACATGGCTATTGACCTTCTCCCGGGAACTAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180543 True 526 TUCP 0.60 2 21009907 21015916

Neighbor

gene id symbol gene type direction distance location
sla2 sla2 coding upstream 582828 20409205 ~ 20427079 (+)
LOC103029094 LOC108429302,LOC107696986,LOC107705726,LOC107594424,LOC107724192 coding upstream 728538 20253247 ~ 20281369 (+)
LOC103028561 LOC108429303 coding upstream 764216 20135533 ~ 20245691 (+)
LOC103040552 sulf2,sulf2b,LOC108429304,LOC107693554,LOC107724188,LOC107705722 coding upstream 877031 19908724 ~ 20132876 (+)
sycp2 NA coding upstream 1582077 19401855 ~ 19427830 (+)
oprl1 oprl1,LOC107727003,LOC107681404,LOC107666560 coding downstream 156041 21171957 ~ 21247961 (+)
myt1 LOC108440949 coding downstream 763648 21779564 ~ 21859171 (+)
LOC103034797 pcmtd2,LOC108440950,LOC107559486,LOC107747485,LOC107690852,LOC107707759,LOC107558232,LOC100536777 coding downstream 854541 21870457 ~ 21880919 (+)
plagl2 plagl2,LOC107558237,LOC107681868,LOC107707758,LOC107747490,LOC107559482 coding downstream 908419 21924335 ~ 21992497 (+)
LOC103042077 NA coding downstream 1367526 22383442 ~ 22390535 (+)
G133497 NA non-coding upstream 38956 20970730 ~ 20970951 (+)
G133474 NA non-coding upstream 123360 20886166 ~ 20886547 (+)
G133443 NA non-coding upstream 217521 20792083 ~ 20792386 (+)
G133438 NA non-coding upstream 217989 20742958 ~ 20791918 (+)
LOC111194108 NA non-coding upstream 346822 20660063 ~ 20663085 (+)
G133506 NA non-coding downstream 41791 21057707 ~ 21057916 (+)
G133508 NA non-coding downstream 44543 21060459 ~ 21104343 (+)
LOC111194019 NA non-coding downstream 79281 21095197 ~ 21096873 (+)
G133520 NA non-coding downstream 117815 21133731 ~ 21134054 (+)
G133523 NA non-coding downstream 121759 21137675 ~ 21138588 (+)
tcea2 tcea2 other upstream 226046 20766916 ~ 20783861 (+)
LOC103029397 ndrg3,LOC103029397,LOC107724194,LOC107705728,LOC107696989,LOC107693556,LOC108429301 other upstream 514076 20293163 ~ 20495831 (+)
G133246 NA other upstream 885359 20123390 ~ 20124548 (+)
LOC103042214 LOC103042214 other upstream 1649016 19347468 ~ 19360891 (+)
G133076 NA other upstream 1965721 19043494 ~ 19044186 (+)
G133509 NA other downstream 53400 21069316 ~ 21074051 (+)
LOC111194020 NA other downstream 1389582 22405498 ~ 22407251 (+)
LOC103037602 LOC108435244 other downstream 2639232 23655148 ~ 23669956 (+)
G134236 sps2,ssr4,LOC107560911,LOC108436301,LOC108275956,LOC107671948,LOC107737640,LOC107741342,LOC107562474 other downstream 3307579 24323495 ~ 24336745 (+)
LOC103040548 myh7b,myh7bb,LOC107672010,LOC107737633,LOC107657025,LOC107741323,LOC107562469,LOC107560867 other downstream 3441960 24457876 ~ 24480372 (+)

Expression


Co-expression Network