CI01000012_01054663_01055748


Basic Information

Item Value
gene id CI01000012_01054663_01055748
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 1054663 ~ 1058353 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_01054663_01055748.mRNA
ATCAAAGAATTCAAAAGATTGACGGCTGTCGATGTGGAATCCACCTTCATTGGAAATTTGGACAATTACATAGAACAGCTCTTTCGTTTATTTCGCACTAAGGGAGGATGTGCAGGATGCAAAATCTGTGATTTGATGAAATTGCTGGACCAGGACACTAATGGGGAAGTGGACCAACAAGACATTGGAGAGCACACACTGAAAATTGTGACCAAAGGGGGCTCTCCAAATGTGAGTCCTTTAGAGGCAGGAATAATCTTACAAGGTGTTGAGGTTCTGGGAGGATTGTCCAGTGTTGCAAATGCATGTGGTGCTCTTCTTGGCCTGATGTATTCTGTAAACCTGAGTTACCCCAAGCCACTGAGGTATACATTTGAACTTTTCCAGAAAATCCTGCTTGAACTAGACAGTCTTTTTTGTCAAATGCGCCTTTAATGGTTCACCACAGCATACATCTTAAAGGGTTAGTTCCCCCTCAAAAATGAAATTTCTGTCATTAATTACTCACCCTCATGTCGTTCCAAACCTGCAAGACCTTTGTTCATCTTCAGAACACAAATGAAGATATTTTTGAAAAAATCGTAGAACCTGCAAGTGCTGAACGTAAACAGCATAAGAGACTGACGGGGAGAGACAAATTTGTCGTTATTTTTGTTTTTGCGCACACAAAGTATTCTTCATAACATTAAGGTTGAACCACTGCAGTCACATGGACTATTTTAACGATGTCTTTAGTACATTTCTGGACCTTGAAAGTGGTGGTTAAATTGCTGTCTATGGAGGGGTCAGAAAGCTCTCGGATTTCATCAAAAATATCTTAATTTGTGTTCCGAAGATGAATGAAGGTCTTACGGGTGAGTAATCAATGACAGAATTTTCATTTTTGGGTGAACTAATACTTTAACAGAAAAGACTAGCTCCATTGCACACTATTTCAGACATACTAACATGGAACACAATTTTAGATACCTAAAGCCCCGTTCACACCGCCAGCGACACGCAGTGACAAAGCGACAGGATCCCATTCATTTCAATGGAGCGCGGGCGACTTCCGGCGACAAGAGCTAAAGTGACCATTGGCGACAGAATGTAGGCGTGTCAAGCGACGGGAGACACGCGACAAAAGTTTAGATATTTCAACTTTATGCAAATCAGGAGCAAATTTCGCGAGCGACAACCAATAGAAGTGAAGGCTCTCTGGAGCTCACGTCACCGTCTCGAGTGCGGGCAAGACAGACAGGACATAGTTCTGGAGCGATTTCACTGTTTTATATGATTTGACTGTACGTACAATAAAACGATGCGTGGAGAAGAAACTGTCGGCAGTCTTGTGAGTTTGATTCATACATTTTGTGCTGTTAATTATATGATGCTGTGAGCAGTTTAGCACTGCTGCAGTTCATATTACAGTTTCCCCTGCATTGTGTTGATTATTAGGGACAAGAAAATTGATTATTTGTCAAATTTTTGACAGTATGAGTGAATTTAATTTGTTGATAGAATGATCGTTAATCTAGTTAATGATTTAATGCACTGAGCTCTACAGTCACAACACTCTACAACAGCAGAATGTTATCTTTAATTCTTTTAAGCCTAATTCCTAGTCAAATTAGAATGATTTCTTAATTTTATATATCATTTGTGATTGCATTTTCTATAGATATGGCCAGACGTGCAGTCTACCAATGATATTAGAGCGACAGCACTAGGAACGCCCACAAACGACTTCACAGTACAGAGACTAGCGACATGCAGCGAAAAAATTCGCTGGCGGTGTGAATGGGGCTTAAGGGTGTTTCCACAATTTTCAGGGGTCTGAGCGTGGTTTGCATGATTTTTGGCCCATATGTGAACACTCAAAATGATCTCAGACCCTTTAAAGATGAACCGAACCGAGACCATCTCGGGAGGTGGTCTGAGTATGGTTGGATTTCATCTTATGGTACGGTTCGCTAAAAACACGCAATCTGAACACAAACCGTGCTGGGCTCACTTGATATTTCCGTTCGCGAATTCCAATGTAGTTTGGTTATCAGATGCCTCAGTACAAATCAGCTGTTCATCGTGGCTGCTTTTTCTCTCAGATCTCTACAAATTATTCGTTCACAAAGTACACTTGTTTATCTGGGAAAGAAATTGTGTATGTTTATCAGTATATTGGATCCATGTATTACTGTAGTTCTTAAAGTGACAGCCTAATAAAACAATCAGTAGAAAGAGTATATGTTTTATTCATACAGTGAAGAATATGCAGTTTTATTTTTTCATTTGATTGTTCACTTTCTTACTTGAATTCTTCTTTTAGGTATACCTACTGTACATGGAAAAGCAGTTTATTTCATTTACATCTTTCTTTTATTGTATTTGTCCTTGTTTTTTTTTATGCTGAAGTTATCATTGCCTTGCAATAAAAAATGATTCAAGGAAAACAATTCAAAATAAATTTGTATTTGTAGCATTTGTAGCAATGTCATTTTACAAAATAATAATTAATAATAATAATCTTTATAAACAAATTTCTTGGTTAGTGAGGCACATACAATTTAAGTGAATGGGATCAAATTTTGAAGGCCATAGGGTCAAGCCATCAAACACTGAACTGGATCCAAAAAGCAACAGTATGAACACAAAGAGGTCTGAGACCACATTCCTACTTAAGTGGACCAAAAAGGATCTGAGTCCTCTTTTAGGGACAGGGACAGTATGAACGTAAAGAGAACTGGGTCATTTTTCACTTAGTTCACCTCTTGGTCCACTTAAAGGGGTTTGAGTTTGGTTCTTTTAAACCAAAGTGTGAAAACACCCTAAATTACATGCATAACACCACAATTTAAAAGTATGTTGATGCTTATTGTTATTTTTTTATATAATATTTACTGTTGTTCAGTAATGTATATTATCAGTTTTTTGTCAAATACCCATTTAATGGTTGACACACACCATTGCACACTAAACATACTAACACAAAATTTTAGAACAAATCATACAGACGTTTTTATTAAAGCTGTAAATTGTTAGCTGTAAAAGTTGCATTTGTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_01054663_01055748.mRNA True 3040 mRNA 0.38 2 1054663 1058353

Neighbor

gene id symbol gene type direction distance location
CI01000012_00991831_01027918 NA coding upstream 26628 991175 ~ 1028035 (+)
CI01000012_00979848_00986445 NA coding upstream 67918 979848 ~ 986745 (+)
CI01000012_00886127_00889703 NA coding upstream 164326 885120 ~ 890337 (+)
CI01000012_00644021_00646785 NA coding upstream 407588 644021 ~ 647075 (+)
CI01000012_00593086_00594741 NA coding upstream 459198 592126 ~ 595465 (+)
CI01000012_01060250_01062758 NA coding downstream 1832 1060185 ~ 1062758 (+)
CI01000012_01080380_01085038 NA coding downstream 22027 1080380 ~ 1085347 (+)
CI01000012_01088839_01099989 NA coding downstream 30486 1088839 ~ 1099989 (+)
CI01000012_01116147_01117336 CALML6, CALM2, CALM3, CALM1 coding downstream 57794 1116147 ~ 1117792 (+)
CI01000012_01119068_01123520 NA coding downstream 60715 1119068 ~ 1123520 (+)
G68894 NA non-coding upstream 20044 967105 ~ 1034619 (+)
G68919 NA non-coding upstream 79036 975071 ~ 975627 (+)
G68811 NA non-coding upstream 239799 814645 ~ 814864 (+)
G68804 NA non-coding upstream 249459 803834 ~ 805204 (+)
G68795 NA non-coding upstream 256241 798165 ~ 798422 (+)
G68940 NA non-coding downstream 15632 1073985 ~ 1074235 (+)
G68972 NA non-coding downstream 125743 1184096 ~ 1191354 (+)
G68978 NA non-coding downstream 137454 1195807 ~ 1196018 (+)
G68980 NA non-coding downstream 147791 1206144 ~ 1207565 (+)
G68985 NA non-coding downstream 156882 1215235 ~ 1215506 (+)
G68725 NA other upstream 369807 683523 ~ 684856 (+)
G68660 NA other upstream 518710 535566 ~ 535953 (+)
CI01000012_00194370_00195347 HCAR1-3 other upstream 848889 193903 ~ 195676 (+)
G68282 NA other upstream 994131 26390 ~ 60532 (+)
G70029 NA other downstream 1564125 2622478 ~ 2631385 (+)
CI01000012_04424569_04425090 NA other downstream 3361886 4424569 ~ 4425756 (+)
CI01000012_04495631_04501066 NA other downstream 3440100 4495631 ~ 4501066 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 4118542 5176895 ~ 5180970 (+)

Expression


Co-expression Network