G134630 (haus7)


Basic Information

Item Value
gene id G134630
gene name haus7
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 25311930 ~ 25317411 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU182119
CTGTTTATAATTCATGTTAGTAAAATACGGCAATTAAAgtacaaaatatttacatactCAAGTTACAATGACTGATAGAGTAACTTCTGAAAAGTCACACTACATTATAATCTCAAGCTAGAAAAACATGTTATGATTAGTGATGGTTTAGAAATGCAGCGTATCTGTTCTTCAGTGACTCCAACCGAttagGTAGTGTGTGCTTCTCTCCCTTGGCCCAGTAtctcttttctgtctgtctatgtttGACTGTCTCTGCCAGTGAGGACGAGGTTTCTGAGAGCTGCTGCAGAGCCTCCAGCTCCATATTGCAGCTGTGCAGGAGCTGATGTACAGACTGGAACAAATGTGCCTGTGGATCGAGTACAGGGGGCGCTCTCTGGCAGTAGCCCTTGAAGTCTGTGTGGTAGACATGGCTAAAGGCGGTCATGAGCTGAGCCATGTCAGATATGGCCAATTTCAGAGCACAGGGTGACAGTGAGGCTCCAGGGCCTGCAGGGTCTGAATGCAGAAATTCACACTTTTGTGTAGCTCTGCTAAAGCAGTCTGAGTGGACTGCAGTAGCTCTTTGGCTTTAGTCAGATCATTGCCATCAATTTTGCCAAAGCCTAAATGCTGATGAGTCctgTTATTTATGTCACTGGATTTAGTGTTGTTTGTCTTAGTCAATGTGGACTGCAAAGCCCTCAGGTGGTCCCGGATGTGTGCAGACCAGGGGTTGCAGACAGGATTCATTAGCTGTACCAGGTCAGACAGGTGGTCAGGGGACATCAGCTCTTTCAGGAGATCCTCATTTCTTACAACATCATCTCCAGAGGAGTTCTCTTTGGACGATGTGTCATTACTATCTTGGGCAATCATTAGAAGCTCGTCCAAAAACAAAAGCTGCCGTAATGGTGTGGCAAGGCCCTGGATTAGCTGCTGATCATCAGGTTTACACAGCATCATTTCATGTCCAAACCGTGTGATTTCTTTGACCACCTCCTCAGTCTGCTCCGATTTGATTGTAGAGAATTTCTCCCTCAGGAAGGGGCATATTCTGATGCAGATCCATTTAAGGATGTCCATGCGATGTAATGAAGGTGTACACAGAAGCTCTTGCATCTGATCAGCTTCTGTCAGATAAAGTCCATCAACCAGGGGGCAGCCAATGCTCTGAAGGGCGCTGTAAACCCGCACAGACAGCTGCTGCGGCTTCGAATTCCCCGCCATGGCTCCTGTGCGTCTGtaacagggttgccaggtccaacaaaaatatccagcccaaaggcAGTCGACAACCCTCCCT

Function

symbol description
haus7 Predicted to enable microtubule minus-end binding activity. Predicted to be involved in centrosome cycle and spindle assembly. Predicted to act upstream of or within cell adhesion and tissue regeneration. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of HAUS complex. Orthologous to human HAUS7 (HAUS augmin like complex subunit 7).

NR:

description
PREDICTED: HAUS augmin-like complex subunit 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182119 True 1288 lncRNA 0.47 11 25311930 25317411

Neighbor

gene id symbol gene type direction distance location
LOC103029812 LOC108436316 coding upstream 93927 25205788 ~ 25218003 (+)
LOC103028649 kctd6b,kctd6,LOC103028649,LOC108436290,LOC107671957,LOC107570288,LOC107737715 coding upstream 127630 25182177 ~ 25184300 (+)
LOC103028342 abhd6b,LOC108436291,LOC107712730,LOC108275644,LOC107699577,LOC107737716 coding upstream 130556 25176018 ~ 25181374 (+)
LOC103027821 NA coding upstream 137790 25135664 ~ 25174140 (+)
LOC103030657 LOC108436320,LOC108276397 coding upstream 179188 25122139 ~ 25132742 (+)
LOC103021519 tnnc1b,LOC108276054,LOC107671989,LOC107568847,LOC107593406,LOC105890642,LOC103374679 coding downstream 223350 25540761 ~ 25544523 (+)
LOC103044939 si:rp71-17i16.4,tnnc2,LOC103044939,LOC108434838,LOC107737591,LOC107568845,LOC101472191,LOC102782874 coding downstream 469618 25787029 ~ 25797553 (+)
LOC103044421 LOC103044421,LOC108434847,LOC108276484,LOC103384678 coding downstream 482018 25799429 ~ 25802413 (+)
LOC103043212 slc35c2,col20a1,LOC108275935,LOC107712700,LOC107699598,LOC107737588,LOC107672031 coding downstream 490567 25807978 ~ 25862859 (+)
dpm1 dpm1,LOC107712706,LOC107737709,LOC107671953 coding downstream 547169 25864580 ~ 25868951 (+)
G134617 NA non-coding upstream 114479 25195961 ~ 25197451 (+)
G134616 LOC107737613,LOC107671963,LOC107560871,LOC108436318,LOC107570281 non-coding upstream 116090 25193210 ~ 25195840 (+)
G134615 NA non-coding upstream 118973 25192591 ~ 25192957 (+)
G134477 NA non-coding upstream 470692 24840943 ~ 24841238 (+)
G134476 NA non-coding upstream 471582 24840129 ~ 24840348 (+)
LOC103024233 NA non-coding downstream 7975 25325386 ~ 25328240 (+)
LOC103022152 NA non-coding downstream 160053 25477464 ~ 25527291 (+)
G134669 NA non-coding downstream 172169 25489580 ~ 25494180 (+)
G134688 LOC103046877,LOC108410447,LOC105890629,LOC107087052,LOC105935867 non-coding downstream 228191 25545602 ~ 25556076 (+)
G134838 NA non-coding downstream 418193 25735604 ~ 25736783 (+)
emd LOC108436312 other upstream 5582 25300781 ~ 25306348 (+)
LOC103026913 flna,LOC108436314,LOC101154674 other upstream 15594 25237471 ~ 25296336 (+)
smim4 smim4 other upstream 121624 25185816 ~ 25190306 (+)
trnae-uuc_18 NA other upstream 500930 24810929 ~ 24811000 (+)
LOC103036968 LOC108436332 other upstream 650396 24605649 ~ 24661534 (+)
G134632 atp2b3 other downstream 2730 25320141 ~ 25324699 (+)
cfap126 cfap126 other downstream 109323 25426734 ~ 25431174 (+)
G134662 NA other downstream 143056 25460467 ~ 25461402 (+)
G135096 alg13,LOC107597764 other downstream 1311458 26628869 ~ 26638528 (+)
LOC103044303 LOC103044303 other downstream 1878894 27196305 ~ 27197918 (+)

Expression


Co-expression Network