LOC103044303 (LOC103044303)


Basic Information

Item Value
gene id LOC103044303
gene name LOC103044303
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 27196305 ~ 27197918 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU183051
GAGAGAAGTGCAGAACACAGAAGCTTGAGAAGTACGCTGTATTTAGATCCAGACTGAGCTAAAGATGAAGACTTTATTACTCGGAGTCCTGCTGATTCTGGCTGTCAGCTTATCGTCAGATGCGGTGGTTGTTCGGGAAGGAGAATTCTCGTTCCAGCTCGACTCAGTGAAAAGACTTTTGGCCCTCATGGCTAAAGACatcccagccaatcagagcagccGCAGAGCTGCCAGCAGTGCGGTGGCAGTGTGTGACAATCCAGCCCTTCCTGAAGAATTTCAGCCTCTGTGCCAGAGCAAAAACGCCCGAGCTTCTTTCTCCAGACTTGCTCGTTATTCCAGGCGTCTTGGGGTGTGTGAGATCTGTGCGTTTGCTGCTTGTACCGGATGCTGAAAGTAGCTCAGAGGATGCTTCTCATGTTTTTCTACAGTTATAGTTTTTTTCATTGTCAGTCTTTTAAAGCTCTGTTACAATAGAAGTATAGTTTGTGTTAAAAATTCTACATATACCATTTTTATGTAATGATCCACTCTGTATATATGTACGATTttacatgtttccttaatattaTAACTCCCAATGCTTAAACACATGACATAACAGGCTACA
>XM_007246310.3
aggaagagagagggaagtATTTAAAGGAGAGAGGTAGTAGAGAGAAGTGCAGAACACAGAAGCTTGAGAAGTACGCTGTATTTAGATCCAGACTGAGCTAAAGATGAAGACTTTATTACTCGGAGTCCTGCTGATTCTGGCTGTCAGCTTATCGTCAGATGCGGTGGTTGTTCGGGAAGGAGAATTCTCGTTCCAGCTCGACTCAGTGAAAAGACTTTTGGCCCTCATGGCTAAAGACatcccagccaatcagagcagccGCAGAGCTGCCAGCAGTGCGGTGGCAGTGTGTGACAATCCAGCCCTTCCTGAAGAATTTCAGCCTCTGTGCCAGAGCAAAAACGCCCGAGCTTCTTTCTCCAGACTTGCTCGTTATTCCAGGCGTCTTGGGGTGTGTGAGATCTGTGCGTTTGCTGCTTGTACCGGATGCTGAAAGTAGCTCAGAGGATGCTTCTCATGTTTTTCTACAGTTATAGTTTTTTTCATTGTCAGTCTTTTAAAGCTCTGTTACAATAGAAGTATAGTTTGTGTTAAAAATTCTACATATACCATTTTTATGTAATGATCCACTCTGTATATATGTACGATTttacatgtttccttaatattaTAACTCCCAATGCTTAAACACATGACATAACAGGCTACATGTTCacattattaatacaatattaatatgtTTTGACTTCAAACTAGTTTGTTTCTGTGTCagaattataattttaaataaaactgcatACTCTGTCATTAAGAAA

Function

NR:

description
guanylin-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU183051 False 610 TUCP 0.43 3 27196344 27197812
XM_007246310.3 True 755 mRNA 0.40 3 27196305 27197918

Neighbor

gene id symbol gene type direction distance location
LOC103044020 lactbl1,LOC108434488 coding upstream 6048 27179846 ~ 27190257 (+)
LOC103044922 dhrs3,dhrs3a,LOC108275517,LOC107703071,LOC107712670,LOC107687474,LOC107593436,LOC107737702 coding upstream 283477 26902018 ~ 26912828 (+)
LOC103045233 igsf21,LOC108275566,LOC107712688,LOC107593375,LOC107591133 coding upstream 296326 26878902 ~ 26899979 (+)
LOC103045544 LOC108434548 coding upstream 323794 26801904 ~ 26872511 (+)
rpl22 rpl22,LOC108414460,LOC103047485,LOC102779685,LOC107737211,LOC107555851 coding upstream 423131 26770714 ~ 26773174 (+)
eif4g3 LOC108434436 coding downstream 4794 27202712 ~ 27260752 (+)
LOC103042991 LOC108434426,LOC108276488,LOC107703064,LOC107591105,LOC107729743 coding downstream 154822 27352740 ~ 27368668 (+)
LOC103040114 LOC108434374 coding downstream 186001 27383919 ~ 27518599 (+)
gpr157 LOC108434350 coding downstream 459931 27657849 ~ 27666697 (+)
LOC103039283 LOC108432612,LOC108276125 coding downstream 483187 27681105 ~ 27694894 (+)
G135289 NA non-coding upstream 33219 27153449 ~ 27163086 (+)
G135288 NA non-coding upstream 47732 27144357 ~ 27148573 (+)
G135190 NA non-coding upstream 267162 26915111 ~ 26929143 (+)
G135188 NA non-coding upstream 313825 26882181 ~ 26882480 (+)
G135178 NA non-coding upstream 319581 26845550 ~ 26876724 (+)
G135309 NA non-coding downstream 36762 27234680 ~ 27236114 (+)
G135315 NA non-coding downstream 77209 27275127 ~ 27324515 (+)
G135371 NA non-coding downstream 177785 27375703 ~ 27376532 (+)
G135411 spsb1,LOC103042472,LOC107591103,LOC107716103,LOC107703063,LOC107687410,LOC107593433 non-coding downstream 384413 27582331 ~ 27598859 (+)
LOC103039899 NA non-coding downstream 429497 27627415 ~ 27649689 (+)
G135096 alg13,LOC107597764 other upstream 557777 26628869 ~ 26638528 (+)
G134662 NA other upstream 1734903 25460467 ~ 25461402 (+)
cfap126 cfap126 other upstream 1765131 25426734 ~ 25431174 (+)
G134632 atp2b3 other upstream 1871606 25320141 ~ 25324699 (+)
emd LOC108436312 other upstream 1889957 25300781 ~ 25306348 (+)
LOC111194129 NA other downstream 563229 27761147 ~ 27871003 (+)
LOC103041614 NA other downstream 814991 28012909 ~ 28040566 (+)
LOC103039855 LOC108443465 other downstream 985388 28183306 ~ 28204183 (+)
G135579 NA other downstream 1028520 28226438 ~ 28242041 (+)
LOC103033230 NA other downstream 1548853 28746771 ~ 28834600 (+)

Expression


Co-expression Network