CI01000012_03357081_03369647 (FAM135A)


Basic Information

Item Value
gene id CI01000012_03357081_03369647
gene name FAM135A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 3357081 ~ 3369647 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_03357081_03369647.mRNA
TCAGATCTGGCTTTCCCAGCAACAGTTCAAGATGATGTGGTCTGCAGCAAAACCTTTCAGATCCTTTACAAAAATGAGGAGATTGTTGTCAACGATGTCCTCATATTCAAAGTGATGATGCTGCTAGATGCAAAGAAGGTGGAAGAGTCCTTAAATGAAATGGACTTTCAGCTGTCTTTGGACCTGTTCTTCACCGATGGCGACTACTCGCCCGAGGACCCTAGTTCTCTCCAGAGCATCAGCAGTCGCACACTGCGTTTGCACTTTAGCCTCCACAGAGGCATCCACCAGCACGTCAACGTAATGTTTGACTACTTCCACCTGTCTGTCATCTCTGCCACCATCCACGCATCACTGGTGGCCCTCCATCAACCTCTAATCAGTTTCCCGCGGCCAGTAAAAAGCACCTGGTTGAATCGTAACGCTCCGGCACAAAGCAAAGACTCTCTCATCCCACCACTGGAATCTGTGGTGTTTGGCACCACCTACGTCAAGCAGCTGTCACCAGATGGCAAATCCTTCCTGGTATCGGATCAGTGCCTACAGCATGCCTTCAGCCTGCATGAGAACATGTGTGCCAGCTTGCTGCGGGCATATCAGGGCCTGTTTTGTTACTTAACCTCCCTGACCAAGAATCTGCCCGCATCCCAGCGCATGGAGCTAGCCAAGCCCAGCATGCAGGTCCTTTATGAACGAGTTCTCAGAAGACCTTATCCTCCAGGCCAAAGGCACGTCTACATAGAGAAACTTGATGTGGAGGCCCGACTTAATGAGCTTTGTGAGCAAGTAAAGCAAAGGGCAGAGAGCCCAGATGAGTTGGCTGAACTGGTGAACATGAATTTGGCTCAGCTGTGCTCTCTGCTTATGGCATTGTGGGGGAATTTCCTGGAAGTGGTGTCTCTGAATGAACGTGTCTCTGCGTTGTTGGCCCAGGAGCACCACACACTACGGGTGCAAAGATTTGCAGAAGCTTTCTTTTGTCTTGAACACCCAAGACAGAGTGCTCTGGCCTACCAGGAACTGCATGCTCACAGTCACCAACAGATGACCGCAGCTATCAAAAACTCTTCCTACTTCCTGTCCTTACCACCTCTTCCTGTTGAATGTGCTGATCTTGATGGAGATGTGAACTCCCTACCAATCATCTTTGAGGACAGATATTTAGAATCCATTACTGAAGATCGTGATGGTCCATGGCTTGGTCTCCATAACACTAGAAGTGGCTCTGTGTCCACTAAAGCAGACAGGTCCAACTCAAAGGACTGCATTGCTAGTGGATTGGGAGCCCTTGGTCCATGCCCTGATAAGCAGCAAGCTGCCCTCACCACCACTTGGCCTGAGCAAAACGAGCCTCCCCTCAAATCCAAAGCCAAATCCATCAAGCTGAAGAAGAATGCCAAGACTGAAAATTCAAAGAAGCTGGTCAGGCAGACCTCAAAAGACTCTGTGGTCCTCACAGGCTACAAGAACTTGAAGATTCCTCTCGGCGAACCAACCACCAAATCCAAAGAAGTTGATGCTCAGTGCAATCCAAAAGACGAGCTAGATGATAAAGGCAAATGCATCCTCCAGAATGAAACCACAACCATGCATTGTGCTCAGAGTGCTAAAGACTGTACCACAAGTGACATTCAAGGCAACGTCAGTGTCCAGAGCGACAGCTTTTCCAATCTTTTGAGTTTGCAAATGCAGGCTAGGCCCCAGGCAGGTACTGGAGCAGAAGCCACACAGAGTGCAGCTGCCAGAGTTGATTTGACACATCCACCTGCTGGGCTCAGACATATTGATGTCAAACCAAGCGACAAGGACCCCTACCAGGGCGATAAGGTCACCGTTCTCTTACCGCACCACTCAGATCCAACCCCCAGGAGAGATGTTCCAGAGATCACACAGACCGATTTCTCTGAGTTCAAGAGTCGCGTTGGGGATGGCGCCACGTACATTGGAGCTTGTGGAGCCGCACTGAGGAGTGATTGTGTTCCTCAAGCCTCCTCCAGGCTCTCAGACTCAGGAATCGAGAGCGAGCCCAGCTCTGCGACACAGCTAGCACCGGTTTCTCCATCTCCTTTTGCTTCTTCTGGCCTCGAGGCACCTACAGAGCTTATTCCACAGAGCACCCACCAGAGACCACCTCCGCTCAGCCCTGCTTCCAGAGGAACCACCGCGTTGGAGGGCCTGAATCCAGAGAGCACCAGCGGCATCAGCGGAGTCCAGTCTTCTCTTACCTCCATTAACTCCCTCCCCTCGGATGATGAGGTGGAGACAGAAGACACTAGCAGGAAGTCCAGCATCCTGGTGCAGGAACAGAGTCTCATCTTTTCAGGAGAATCTCACAGCCTCCTGCAGTCGAGCTCTAGAGTTTTGGCTCAACAAAAAGCCCCCATCAGTCATGGAGATGGGCCTGTGTCTCACGATGAGTACTCTGCTCTCCAGTCCCGCTGTGAAACTTCTGCTCCTGACAGGCCGACAGGTTCTACTGAGACAGAACTTCCAGGTGGTGTAGCACTGGGGCCAGAAGCATGTAGTGAGCCTCAGACAGCCGCCCAGTCCAGTACATCAGTCACTAGCAGCACAGACCTGGTGAAGAAAGGCTTTGTGGAGAACTACTTCGGCTCTCGCTCCAGCACTGATATATCTGAGATCAGCCCATTGGAGACTGCAGCCGTGACGCTGGGGATTCAGACGTGCCCCAATGCTAATGACGAAGAGAATGAGGAGGAGGAGCAGGAACATGAAAATATTGAGAACGGTTACTATGAGGAGACAGACGGGCTGGTTTATGTCAATGGAATCCCAGGGGAGGAAGGGAGGTGTGAGGATGGGGGAGCAGAGGGAAGAACCCTTTTTTATGATCACCTGGGTTTGGAACAGCTCCAGGAAACATACATCCCCTCAGCTGGCCTGCAGACACGGCCTCCTGGACCAGCTCCAACCAGCAATGACCTGTGCTGGTACAAGAGCGCCCCTACTGCTCAGATGACAGCGTTTGTCCAAGCAAAAGAGGAGTTGAAGCAACTAAAGTTGCCAGGGTTCCTGTACAGTGAGGTGGCAGATCTGGCTTCCACTGTGCCATATTTCAGCATGGATGAGGATGAAAACTGTGATGAGGGCATACACCTCATAGTGTGTGTACATGGCCTGGATGGTAACAGTGCAGATCTACGTCTAGTGAAGACTTATCTGGAGCTTGGCTTACCTGGTGCTCGTATAGATTTCCTAATGTCAGAGCGCAATCAGAATGACACATTTGCAGATTTTGAGTCAATGACTGACAGACTTTTGGATGAAATAGTGCAGTACATACAAATCTACAACCTCACAGTTTCCAAGATAAGTTTTGTGGGTCACTCTCTGGGAAATCTGATTGTGCGCTCCGTGCTGACGCGGCCCAGGTTTAAGTGTTATCTTAGCCGACTCCACACGTTTCTGTCTCTGTCTGGACCTCATCTTGGCACGCTGTACAACAGTTCGGCCCTCGTCAATACCGGGTTGTGGTTTATGCAGAAGTGGAAGAAATCTGGCTCTCTGCTGCAGCTGACCTGTCGTGACCACTCTGACCCACGCCAGACTTTCCTCTATAAGCTAAGCAAGAAAGCAGGTCTTCAGTTCTTCAAGAACGTGGTGCTGGTGGGGTCCCTTCAGGACCGTTACGTCCCCTATCATTCTGCCCGAATCGAGATGTGCAAAACAGCCTTAAAGGATAAACAGACTGGTCCAGTGTATGCCGAGATGATCGAGAACCTTCTACTCCCCGTGCTTCAGAACAAAGACTGTAACCTGGTGCGTTACGACGTCATCCATGCGCTGCCCAACACCGCCAACTCCCTGATTGGCCGGGCAGCCCACATCGCCGTCCTGGACTCTGAGATTTTCCTGGAAAAGTTCTTCCTGGTGGCAGGGCTCAAGTTTTTTCAG

Function

symbol description
fam135a Predicted to be involved in cellular lipid metabolic process. Orthologous to human FAM135A (family with sequence similarity 135 member A).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_03357081_03369647.mRNA True 3915 mRNA 0.51 18 3357081 3369647

Neighbor

gene id symbol gene type direction distance location
CI01000012_03327683_03341200 NA coding downstream 15881 3327632 ~ 3341200 (-)
CI01000012_03292460_03316923 TARBP1 coding downstream 40158 3292160 ~ 3316923 (-)
CI01000012_03284445_03291645 NA coding downstream 65436 3284345 ~ 3291645 (-)
CI01000012_03280454_03281289 NA coding downstream 75792 3279871 ~ 3281289 (-)
CI01000012_03172201_03172736 MARVELD1 coding downstream 184345 3171632 ~ 3172736 (-)
CI01000012_03437950_03468790 NA coding upstream 68142 3437789 ~ 3468853 (-)
CI01000012_03595690_03618511 NA coding upstream 225885 3595532 ~ 3618511 (-)
CI01000012_03717828_03724221 NA coding upstream 347813 3717460 ~ 3725744 (-)
CI01000012_03729351_03731119 NA coding upstream 359528 3729175 ~ 3732465 (-)
CI01000012_03771803_03792867 ADGRB3 coding upstream 401531 3771178 ~ 3793190 (-)
G70916 NA non-coding downstream 120441 3231699 ~ 3236640 (-)
G70833 NA non-coding downstream 241986 2944011 ~ 3115095 (-)
G70868 NA non-coding downstream 335209 3021337 ~ 3021872 (-)
G70818 NA non-coding downstream 427995 2928500 ~ 2929086 (-)
G70808 NA non-coding downstream 429168 2927665 ~ 2927913 (-)
G70956 NA non-coding upstream 15659 3385306 ~ 3385513 (-)
G70814 NA non-coding upstream 127388 3497035 ~ 3504550 (-)
G70813 NA non-coding upstream 160962 3530609 ~ 3545040 (-)
G71717 NA non-coding upstream 292976 3662623 ~ 3663090 (-)
G71699 NA non-coding upstream 353480 3723127 ~ 3743099 (-)
G70774 NA other downstream 490189 2866508 ~ 2866892 (-)
G69562 NA other downstream 1980783 1332075 ~ 1376298 (-)
CI01000012_01139864_01192154 TTC7A other downstream 2205883 1135676 ~ 1192154 (-)
G69332 NA other downstream 2581202 775364 ~ 775879 (-)
G69277 NA other downstream 2626616 729920 ~ 730465 (-)
G71898 NA other upstream 1163883 4533530 ~ 4534672 (-)
G72068 NA other upstream 1406573 4776220 ~ 4780132 (-)
G72204 NA other upstream 1924126 5293773 ~ 5302206 (-)
CI01000012_05414096_05416676 TTC9 other upstream 1993995 5413369 ~ 5416780 (-)
G72294 NA other upstream 2093193 5462840 ~ 5465857 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location