cyr61 (cyr61,cef10)


Basic Information

Item Value
gene id cyr61
gene name cyr61,cef10
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 18362715 ~ 18365465 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007243358.2
ATGGGAGCGCGTTCACAGCACACAGCGAAGCGCGCTCACCGAGAGCACAGGAGCTCCTCCGGCTTCCAGCCTACACACCTACTACAACACACCGCCGCGTGCTCACCCTCAGAGCACTGAAGAGGAGCTTAACGCCTAAGGAATTGTCCATTTTTGTTTGGGTTTcttggagaagaagaagaagaagagcaagATGATGTCTCTTTTGTCAGTGGTCTTGATACTCTTGGGGGGCTTCAGCATGGTACTCAGCACATGCCCTGAGGAGTGCGAGTGTCCCCTAGAGCTGCCCAAGTGCGCACCGGGAGTCAGCCTGGTGTCGGACGCCTGCGGGTGCTGCAAGGTGTGCGCGAGGCAGCTGAATGAAGACTGCAGCAAGACAGAGCCCTGCGACCACACCAAAGGGCTGGAGTGCAACTTCGGGGCTAGTTTCGGAGCAGCCAGAGGCATCTGCCGAGCCAAATCCGAAGGCAGACCCTGCGAGTACAACAGCAGGATCTACCAGAATGGAGAGAGCTTCCAGCCCAACTGCAAACACCAGTGCACATGCATTGACGGAGCAGTAGGCTGCATACCTCTCTGTCCCCAGGAACTGTCCCTGCCCACCCTGGGCTGTTCAAACCCCAGGCTGGTCAAGGTACCCGGCCAGTGCTGCGAGGAATGGGTGTGCGACGACTCAGCACAGCTGGATCCCTCCGACAAGCTTTTCGGCAAGGAGATCATGCCCGACGAGACAGAGAACGACCTCACCAACCGGAACGAGCTGGTGGCCAATGTGAAGGCTGGCCTGAAATCTCTTCCCGCATTCAGAGTCCAGCCTGAGACCCACATGTTCGGCAGCCAGAAGTGCATTGTTCAGACCACACCCTGGTCACAGTGTTCCAAGTCCTGTGGCACCGGCATCTCCACCAGGGTCACCAACAACAACGCAGAGTGCAAGCTGGTCAAGGAGAGCAGGATCTGCGAGGTCCGCCCCTGCACACAGTCTCCATACTCCAGTCTTAAGAAAGGGAAGAAGTGCAACAGAACCAAGAAGTCCGCCCAGCCAGTCAAGTTCACCTTCGCCGGCTGCTCCAGCCTGAAGAAGTACCGTCCCAAGTACTGTGGCTCCTGCGTGGATGGTCGCTGCTGCAGCCCCCAGCAGACCCGTACTGTTCGCGTCAAGTTCCGCTGCGAGGACGGCGAGACCTTCAACAAGAACGTGATGCTGATCGAGACCTGCAAGTGCACCTCTAACTGCCCCCACACCAACGAGGCCTCCTACCCCTTCTACCGGCTCTTCAACGACATACACAAGTTCAGAGACTAAGGCGGGGAGGGAATCCCGGTTACAGAATGACGTCAATGGTGACGTCAGAGCGGCCAATCGCAGCTTGGCTGGAAATCGGAGGCCCACCCCCTTCGGCCAGTCGACTACCACCGTTAGATTCCCACGGAATCATGGGCTTTCATTGAGGAGTTTGGCGAAGTGCACTGTTTGCTGAGGCCTTGTCAGCGTTCGATACTTTCAACTTTTGAAAGACTCGCTCCACAGTGGAGCAATACGTTTTGGTAGCTTCATTATGGAGCAACTTGTAAAGTCAAGTACATTTTGTAAAACGTAGTTGTTAATGTTCAATttcttgtgtgtatattttgatCTCTGAACACAAAATGCAGCCCTACAACTGTAGacttgtatgtgtatgtatctCCAAATATGCATATGTGCACATGCATCATTTCGCTCGCGTTCATAAAAACCACGCTCCTGTCATTTCATCAGTTACGCCATGCTGTGGTATTCCAACACAATATATGTGGTAACATTCCTTCCTAATGTGGACAAATGGGTTCATATTGTTCGGCAGCTATTGAAAACCATCCCGACGTCAGAGAATTAGCAACAAAGTTGACTTAAAGaatgaatgtttttattattgttattaatattatttatcagAAATGTAGCTACTTTATTTGAATATTGTCATACTGGAATAAAGTGTAAAATGATCTAATTTtatatgttacaaataaaaaaagatttatttatgACATTAA

Function

symbol description
cyr61 insulin-like growth factor-binding protein 10

NR:

description
PREDICTED: protein CYR61

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K06829 CYR61, CCN1, IGFBP10; insulin-like growth factor-binding protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007243358.2 True 2043 mRNA 0.51 5 18362715 18365465

Neighbor

gene id symbol gene type direction distance location
LOC111194038 NA coding upstream 148042 18213885 ~ 18214673 (+)
wdr63 NA coding upstream 236779 18077650 ~ 18125936 (+)
LOC103026658 LOC108425505,LOC107715025,LOC107671876,LOC106572368,LOC105022778 coding upstream 340718 17804083 ~ 18021997 (+)
LOC103044854 LOC103044854,LOC108425484 coding upstream 630194 17630771 ~ 17732521 (+)
sars sars,LOC107671868,LOC107697960 coding upstream 735126 17601124 ~ 17627589 (+)
LOC103024383 LOC108441536,LOC108275807,LOC107550164,LOC107694430,LOC105904845 coding downstream 373593 18739058 ~ 18768420 (+)
LOC103025011 abce1,LOC108441533,LOC108275804,LOC107653221 coding downstream 467884 18833349 ~ 18853525 (+)
LOC103025641 NA coding downstream 549920 18915385 ~ 18923002 (+)
LOC103025945 NA coding downstream 589224 18954689 ~ 18962846 (+)
LOC103045888 cntn3a.1,LOC108438208,LOC107696975,LOC107663068,LOC107705712,LOC107551535 coding downstream 669978 19035443 ~ 19195367 (+)
G132873 NA non-coding upstream 1836 18360506 ~ 18360879 (+)
LOC111194096 NA non-coding upstream 9367 18345847 ~ 18353348 (+)
G132867 NA non-coding upstream 13973 18345504 ~ 18348742 (+)
G132861 NA non-coding upstream 77887 18283450 ~ 18284828 (+)
G132856 ddah1 non-coding upstream 107713 18241652 ~ 18255002 (+)
G132918 NA non-coding downstream 38029 18403494 ~ 18435963 (+)
G132917 NA non-coding downstream 69405 18434870 ~ 18440619 (+)
G132926 NA non-coding downstream 70801 18436266 ~ 18515906 (+)
G132946 NA non-coding downstream 258107 18623572 ~ 18624302 (+)
G132948 NA non-coding downstream 276754 18642219 ~ 18642750 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other upstream 838362 17479938 ~ 17524353 (+)
snrpg snrpg other upstream 852900 17506451 ~ 17509815 (+)
LOC103031494 NA other upstream 2624934 15730897 ~ 15737781 (+)
ddost ddost,LOC107673085,LOC107687429 other upstream 2896630 15459862 ~ 15466085 (+)
fam131c fam131c other upstream 2965146 15364390 ~ 15397569 (+)
G133076 NA other downstream 678029 19043494 ~ 19044186 (+)
LOC103042214 LOC103042214 other downstream 982003 19347468 ~ 19360891 (+)
G133246 NA other downstream 1757925 20123390 ~ 20124548 (+)
LOC103029397 ndrg3,LOC103029397,LOC107724194,LOC107705728,LOC107696989,LOC107693556,LOC108429301 other downstream 1927698 20293163 ~ 20495831 (+)
tcea2 tcea2 other downstream 2401451 20766916 ~ 20783861 (+)

Expression


Co-expression Network