LOC111194038


Basic Information

Item Value
gene id LOC111194038
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 18213885 ~ 18214673 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022676751.1
CTTCAACTGACCTTCAGCCTGATACAGTTCCATTCCATCCAGATCTACACCAACAGGTttttacaccacacacatttatacaccacacacatttatcaccacacactttctacacttTCTTCACTTTCTACATTTACATATACTTTCACTTACACCCAACATCTTCATCGCCATTATCAACCTCGCCACCTCATCGGAGCAACGGGGAAGGAAGAGGACCAGACCCCAGGAGACACTTGATGACCCTGGAGCATCTGctgctcctgcagctcctgcagATCCAGCAGCGAAGAGGAGGAAGACGCAGACCTCGACCACTGTTCTTACCCACAGGATATGGTCGTCAGGAACGCCTTCTGTTCCAGGCTGCTGCGGTTGTTAGGAGATTTCTTGTGTCGCTGCTGTCGACTCCTCACGGGTCTTCGTCCCACCGTCCCCCCGTTTTGGATTCTCAACGTGGACGTGTCACTGACCGTGCTCGGATATCAGGACCAGCCCTTCATTTGCCCAGGCACCGTGGTCTTTCTTTACATGCTGTGCCGCGACACTGTTCCGGCGGACGTGTCCAGCGTGGAGGAGCTGCGGGCGGTGCTCCTCTCCTGCCTGTATGTATCGTATGCATACATTGGCCATGAGATCAGCTACCCAGCACTGCCTTTTATTCTGAAGACCGACAGGCAGACATTTTGGAGGCGCACACTGGACATCACCATGCGCATGAGCCGGAAGATGCTGGAGATCAACATCTCGCCACACGTCTCCGACctgaagaagaagatggattgttaa

Function

GO:

id name namespace
GO:0045860 positive regulation of protein kinase activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022676751.1 True 789 mRNA 0.52 1 18213885 18214673

Neighbor

gene id symbol gene type direction distance location
wdr63 NA coding upstream 87949 18077650 ~ 18125936 (+)
LOC103026658 LOC108425505,LOC107715025,LOC107671876,LOC106572368,LOC105022778 coding upstream 191888 17804083 ~ 18021997 (+)
LOC103044854 LOC103044854,LOC108425484 coding upstream 481364 17630771 ~ 17732521 (+)
sars sars,LOC107671868,LOC107697960 coding upstream 586296 17601124 ~ 17627589 (+)
LOC103023305 NA coding upstream 624160 17564407 ~ 17589725 (+)
cyr61 cyr61,cef10 coding downstream 148042 18362715 ~ 18365465 (+)
LOC103024383 LOC108441536,LOC108275807,LOC107550164,LOC107694430,LOC105904845 coding downstream 524385 18739058 ~ 18768420 (+)
LOC103025011 abce1,LOC108441533,LOC108275804,LOC107653221 coding downstream 618676 18833349 ~ 18853525 (+)
LOC103025641 NA coding downstream 700712 18915385 ~ 18923002 (+)
LOC103025945 NA coding downstream 740016 18954689 ~ 18962846 (+)
G132844 NA non-coding upstream 16243 18185377 ~ 18197642 (+)
G132837 NA non-coding upstream 74363 18137952 ~ 18139522 (+)
G132818 NA non-coding upstream 99327 18062628 ~ 18114558 (+)
G132814 NA non-coding upstream 158871 18054671 ~ 18055014 (+)
G132813 NA non-coding upstream 159910 18053409 ~ 18053975 (+)
G132846 NA non-coding downstream 22338 18237011 ~ 18238036 (+)
G132856 ddah1 non-coding downstream 26979 18241652 ~ 18255002 (+)
G132858 NA non-coding downstream 33243 18247916 ~ 18248713 (+)
G132861 NA non-coding downstream 68777 18283450 ~ 18284828 (+)
G132867 NA non-coding downstream 130831 18345504 ~ 18348742 (+)
plpbp prosc,LOC107671833,LOC107715029,LOC107707038,LOC107598604,LOC107697965,LOC107593998 other upstream 689532 17479938 ~ 17524353 (+)
snrpg snrpg other upstream 704070 17506451 ~ 17509815 (+)
LOC103031494 NA other upstream 2476104 15730897 ~ 15737781 (+)
ddost ddost,LOC107673085,LOC107687429 other upstream 2747800 15459862 ~ 15466085 (+)
fam131c fam131c other upstream 2816316 15364390 ~ 15397569 (+)
G133076 NA other downstream 828821 19043494 ~ 19044186 (+)
LOC103042214 LOC103042214 other downstream 1132795 19347468 ~ 19360891 (+)
G133246 NA other downstream 1908717 20123390 ~ 20124548 (+)
LOC103029397 ndrg3,LOC103029397,LOC107724194,LOC107705728,LOC107696989,LOC107693556,LOC108429301 other downstream 2078490 20293163 ~ 20495831 (+)
tcea2 tcea2 other downstream 2552243 20766916 ~ 20783861 (+)

Expression


Co-expression Network