CI01000012_04966772_04976751 (PYGL)


Basic Information

Item Value
gene id CI01000012_04966772_04976751
gene name PYGL
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4966715 ~ 4976903 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_04966772_04976751.mRNA
CTATAAAAATATGAGGCTTGTGACCCCGTGTGCTCGGTGTAACCGGTGTTGTTCAGGATGGCGACCCCTCTAACGGACCAGGAAAAACGCAAGCAGATCAGCATCAGAGGGATCGTCGGTGTGGAGAATGTGGCGGAGCTAAAGAAGGGCTTCAACCGGCACCTGCACTTCACGCTGGTCAAAGACAGGAACGTCGCGACGCCGCGGGATTATTATTTCGCTCTCGCGCATACGGTGCGTGATCATCTGGTGGGCCGCTGGATCCGAACACAGCAGTTCTACTATGAGGCCGACCCGAAGCGTGTATATTATCTGTCATTGGAGTTCTACATGGGTAGAGCGCTCCAGAACACCATGATTAATCTGGGTCTGCAGAACGCCTGTGATGAGGCTATCTACCAGCTGGGGTTGGATATGGAGGATCTGGAAGAGATGGAAGAAGATGCTGGATTAGGCAACGGAGGCCTGGGAAGATTAGCAGGTCTCTTTCTCTCTTGCTCTTGCTCACACACTATACAACGATCCACAGCTTGTTTTCTCGACTCCATGGCGACTCTGGGTCTGGCTGCTTATGGATATGGGATCCGATATGAGTATGGAATCTTCAACCAGAAAATCAAAGATGGCTGGCAGGTTGAGGAAGCGGATGATTGGTTGAGGTATGGTAACCCCTGGGAGAAGGCCCGTCCTGAGTTCATGCTACCTGTGCATTTCTATGGCCGTGTGGAGGAAGAGGAGGGGAAGGAGCCGAAATGGGTTGACACACAGGTGGTCCTGGCCATGCCGTACGACACGCCAATCCCTGGCTACATGAACAACACGGTGAACACCATGCGCCTGTGGTCCGCACGCGCTCCCAACGACTTCAATCTCCGAGACTTTAATGTTGGTGATTATATTCAGGCAGTTTTGGACCGTAACTTAGCAGAAAACATTTCCCGCGTGCTTTATCCAAATGACAATTTTTTTGAGGGAAAGGAGCTGCGTTTGAAGCAGGAATATTTTGTGGTGGCAGCAACTTTACAAGATGTGATTCGCCGCTTTAAGACCTCGAAGAGAAACTGCTCTGGACCGTTGTCATTTGACAGCTTCCCTGATAAGGTTGCCATCCAGCTGAATGATACTCATCCTGCTATGGCCATTCCTGAGCTGATGAGGATATTTGTGGACATTGAGAAACTGGACTGGGACACAGCCTGGAATATCACTAAGAAAACATTTGCATACACCAACCACACAGTTCTGCCTGAGGCGCTGGAGCGCTGGCCAGTCGAACTGATGGAGAAACTTTTACCCCGACATCTGCAGATCATATACCAGATCAACCAAACACACCTGGATGCTATCGGTGAAGAGTATGTAAAAGATCTGACTCAGCTGCAGAAGCTGAATGATCTGGTTGACGATGACGCCTTCATCCGAGATGTAGCCAAAGTCAAACAGGATAACAAGCTAAAGTTTGCACAGTATTTAGAGAAGGTGTACAACGTGGACGTAAATCCTGCATCCATGTTTGACGTCCATGTGAAAAGAATCCATGAATACAAGCGACAGCTTCTCAATTGCCTCCACGTTATCACCATGTACAACCATATTAAAGAATGTTTCAACTGTTTCACACACAGGAATCAAGAGGAGCCCCATGAAATCGTTTGTGCCACGGACTGTGATTATAGGGGGCAAGATGTCGTCAATAACGATCCTGTGATTGGCCATAAACTGAAGGTCATTTTCCTGGAGAACTACAGAGTGTCATTGGCAGAGAAAGTGATCCCAGCTACAGATCTGTCAGAGCAGATCTCCACCGCAGGTACAGAGGCGTCCGGAACCGGAAACATGAAGTTCATGCTGAATGGGGCGCTGACCATTGGCACAATGGATGGTGCCAACGTGGAAATGGCAGAAGAAGCTGGAGAAGAAAACCTCTTCATCTTTGGCATGAGGGTGGAAGATGTAGCAGAGATGGATAAAGAAGGCTATGATGCATTACAATATTATGAGAGTCTTCCGGAGCTGAAACAGGCCATAAATCAGATTAAAAGTGGCTATTTTTCACCGAAACAGCCTGAGATGTTCAGCGACATCATCAACATGCTGTTCCATCATGATCGGTTTAAAGTTTTCGCAGACTATGAGTCTTATGTCAAGTGTCAAGAGAAAGTCAGCACTCTGTATAAGGATCAGAGAGAATGGACCCGGGTGGTAATTAAGAACATTGCGGCATCTGGAAAGTTCTCAAGTGACCGCACCATTACAGACTACGCCACTGAGATCTGGGGAGTGGAGCCCACTGACCTGAAGATCCCTCCACCCAGTGAACCACGTGAAGCTCTGGAGGAAACCGCTCGCGCCTTGCGCAAGATCTAAACACCTCAGCGCAGTGTTATAGGATCATGAGAAGACTTGTTACAGAAGTTGATATAATTACTTAACTTAGTATGAATTCATTTTCCAGATTTGCTTTCAATTTTTAAATGTTCACGCGTGACTTTCTAAATGAATGCATTGTACTAGCTAAA

Function

symbol description
pygl Predicted to enable glycogen phosphorylase activity and pyridoxal phosphate binding activity. Predicted to be involved in glycogen catabolic process. Predicted to act upstream of or within glycogen metabolic process. Predicted to be active in cytoplasm. Is expressed in eye; heart; kidney; liver; and muscle. Human ortholog(s) of this gene implicated in glycogen storage disease; glycogen storage disease VI; and lactic acidosis. Orthologous to human PYGL (glycogen phosphorylase L).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K00688 PYG, glgP; glycogen phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_04966772_04976751.mRNA True 2519 mRNA 0.48 18 4966715 4976903

Neighbor

gene id symbol gene type direction distance location
CI01000012_04939174_04962741 TRIM9 coding upstream 3974 4938146 ~ 4962741 (+)
CI01000012_04722087_04836261 NA coding upstream 129141 4722087 ~ 4837574 (+)
CI01000012_04647182_04692241 KCNH5, KCNH5B coding upstream 274239 4647182 ~ 4692476 (+)
CI01000012_04595199_04620295 PPP2R5EB, 2A5E, PPP2R5E1, PPP2R5E coding upstream 346262 4593867 ~ 4620453 (+)
CI01000012_04578508_04582452 WDR89 coding upstream 384105 4576995 ~ 4582610 (+)
CI01000012_04981435_05004449 NIN coding downstream 4532 4981435 ~ 5005112 (+)
CI01000012_05006941_05018373 SAV1 coding downstream 30038 5006941 ~ 5018880 (+)
CI01000012_05035890_05063488 MAP4K5 coding downstream 58623 5035526 ~ 5064475 (+)
CI01000012_05065985_05066340 NA coding downstream 89082 5065985 ~ 5066870 (+)
CI01000012_05067336_05074406 CDKL1 coding downstream 90025 5066928 ~ 5074539 (+)
G71518 NA non-coding upstream 18427 4948035 ~ 4948288 (+)
G71513 NA non-coding upstream 36380 4927694 ~ 4930335 (+)
G71512 NA non-coding upstream 40078 4924984 ~ 4926637 (+)
G71511 NA non-coding upstream 44648 4921724 ~ 4922067 (+)
G71506 NA non-coding upstream 50442 4916047 ~ 4916273 (+)
G71523 NA non-coding downstream 57125 5034028 ~ 5034267 (+)
G71172 NA non-coding downstream 160567 5137470 ~ 5139968 (+)
G71529 NA non-coding downstream 184606 5161509 ~ 5162433 (+)
G71171 NA non-coding downstream 327501 5304404 ~ 5305573 (+)
G71225 NA non-coding downstream 432319 5409222 ~ 5411516 (+)
CI01000012_04495631_04501066 NA other upstream 466626 4495631 ~ 4501066 (+)
CI01000012_04424569_04425090 NA other upstream 541068 4424569 ~ 4425756 (+)
G70029 NA other upstream 2335330 2622478 ~ 2631385 (+)
G68725 NA other upstream 4281859 683523 ~ 684856 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 199992 5176895 ~ 5180970 (+)
G71199 NA other downstream 436347 5413250 ~ 5416785 (+)
G71218 NA other downstream 558949 5535852 ~ 5538384 (+)
G71221 NA other downstream 561622 5538525 ~ 5540456 (+)
G71548 NA other downstream 573590 5550493 ~ 5561433 (+)

Expression


Co-expression Network