LOC103028342 (abhd6b,LOC108436291,LOC107712730,LOC108275644,LOC107699577,LOC107737716)


Basic Information

Item Value
gene id LOC103028342
gene name abhd6b,LOC108436291,LOC107712730,LOC108275644,LOC107699577,LOC107737716
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 25176018 ~ 25181374 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677404.1
TGTTGCCTGTGAACCTTGTccattttgctcattttttacttcttcataaacacagaaacatacaACCAAAGGAGATTTGCACATTTTATAATCGCATGGTCCAAAAAACTGGGTTATCTATTGATTAATCTGAGAGATGCGGACAACCCTCCCCCATCATCCATTGCTTGTTAATCTGAATGTTTGTCTGATAATAAAACAGCTGTAAGGTTtagaattgatttatttttttatatcttgctTGATCTTCTGTCTGAATGTATTTCAGGCCAGAGAGACAGTTTCACTAACTGCATGCGCTTTTATTGATAGGGCTCTCACTGACTGCAGCCAGATCTACAGCTGCTATGGATCTGGATGTGCTGAACTTATTTGCCATTGCTATGGGGACCCTGGCTGTTCCCATTCTGCTCTTCATGGCATCTTTTATGCTGTGGCCTTCATCTCTCATCAAAGTGTATTACTGGTACTGGAGGCGAACCCTGGGCCTGCAGGTGTGCTATGCGGAATGTGGAGGATATCGTTTCTGTTACTCTTACAGAGGAAAGCCAGGCTTCAGGCCCTCAATTCTCATGCTTCATGACTTCTCCGCACACAAAGACACATGGCTCTCTATGGTTAAGTACCTTCCCAAACATCTGCACCTCCTGTGTGTGGACATGCCAGGACATGAGGGCACAACACGCACCAACGTAGAAGACTACTCTATCCAGGGCCAGGTTAAGAGAATAAGACAGTTTGTAGAGACTGTTCATCTCAACAGGAAGCCATTCCACTTGGTGGGCATGTCAATGGGTGGAAACGTTGCAGGAGTGTATGCAGCCTGCTACCCCTCAGACCTCTGCAGTATGACGCTCATCTGTCCAGCTGGTCTAAGGTACCCTTGCAAGACCAAGTTTGATGACCAAATGCATGAGCTGGAGATCAGTGAATACACGCTGAGCATTCCTTTAATCCCATCAACCCCAGAGGAAATGGAGGACATGCTAAAGCTCTGCTCACATGTACGCTTTAGAGTCCCTCAACAGATTCTTCAGGGACTGGTGGATGTACGAATTCCACACAATGACTTTTATCATGAAGTATTCATGGAGATTATGGGGGAGAACTCTAAATATGCCTTGCATGAACATCTGCACCTGATCACCACTCCTTTACAAGTCATCTGGGGAAAGCAGGACCAGGTAGTGGACGTTTCTGGGGCAGGTGTGCTGGCTGAGGCTGTGCCAGGCTGCCGTGTGGACCTGCTGGAGAACTGCGGTCATTCTGTAGTGATGGAGCGGCCAAAGCGCACAGCCAAGCTCGTCTTAGACTTTATCATCTCTCATCAGAGTGCAGCGAGTGCCAACAGCAAAAagaaattctgaataaaaatcgGAATATGTGCTAAATGCTGTACGAACTACAGGATGAGTCAAAACAAATCCTCTTTTATATCACAAATGAAATAGAGAAGCCATGTTCCAGACATAACCTGAAAGATTGCCCCCCTTCCCCCTTACTGGCTGGGGTATTTAGATATGTAATTTTCCCTTTTGTTTAATTTACcttttgtttctgaaataaaagataaaagggTGTCCTGTGGCCTTTGACTCACAGACTTTATTAGTATGGATGTGTTCTATGCTAGATGGACAGAATTTAAAAAtttatgaataatgaataaattgAAATATTTGACAAACTAAAGATGTGCATGTGCCTCAATTGCTTAGGGTACACCAATGCCAGAAAAATGTGTAATCTTGACATACCTCAGCAGTTACACTGTGTAGCCAAAAGTACAAGGACACTTAAATCACATATAAATGGGCTTATTGGACtatgtttattaatatataagtgAACAgctctttgtgttttatta

Function

symbol description
abhd6b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ABHD6 (abhydrolase domain containing 6, acylglycerol lipase).

NR:

description
PREDICTED: monoacylglycerol lipase ABHD6-like

GO: NA

KEGG:

id description
K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677404.1 True 1870 mRNA 0.43 8 25176018 25181374

Neighbor

gene id symbol gene type direction distance location
LOC103027821 NA coding upstream 1878 25135664 ~ 25174140 (+)
LOC103030657 LOC108436320,LOC108276397 coding upstream 43276 25122139 ~ 25132742 (+)
LOC103031199 atp6ap1lb,LOC103031199,LOC108436292,LOC107672058,LOC107737620,LOC107560932,LOC107570286,LOC105890636,LOC108275547 coding upstream 60970 25101215 ~ 25115048 (+)
LOC103032751 LOC108436294 coding upstream 154922 25016785 ~ 25021096 (+)
apobec2 apobec2,apobec2b,LOC108276433,LOC107657013 coding upstream 346286 24823510 ~ 24829732 (+)
LOC103028649 kctd6b,kctd6,LOC103028649,LOC108436290,LOC107671957,LOC107570288,LOC107737715 coding downstream 803 25182177 ~ 25184300 (+)
LOC103029812 LOC108436316 coding downstream 24414 25205788 ~ 25218003 (+)
LOC103021519 tnnc1b,LOC108276054,LOC107671989,LOC107568847,LOC107593406,LOC105890642,LOC103374679 coding downstream 359387 25540761 ~ 25544523 (+)
LOC103044939 si:rp71-17i16.4,tnnc2,LOC103044939,LOC108434838,LOC107737591,LOC107568845,LOC101472191,LOC102782874 coding downstream 605655 25787029 ~ 25797553 (+)
LOC103044421 LOC103044421,LOC108434847,LOC108276484,LOC103384678 coding downstream 618055 25799429 ~ 25802413 (+)
G134477 NA non-coding upstream 334780 24840943 ~ 24841238 (+)
G134476 NA non-coding upstream 335670 24840129 ~ 24840348 (+)
G134475 NA non-coding upstream 336083 24839305 ~ 24839935 (+)
G134462 NA non-coding upstream 371222 24804059 ~ 24804796 (+)
G134434 pard6g,LOC108436329,LOC107562464,LOC107702404,LOC107754812,LOC107581070,LOC107672872 non-coding upstream 419539 24751925 ~ 24756479 (+)
G134615 NA non-coding downstream 11217 25192591 ~ 25192957 (+)
G134616 LOC107737613,LOC107671963,LOC107560871,LOC108436318,LOC107570281 non-coding downstream 11836 25193210 ~ 25195840 (+)
G134617 NA non-coding downstream 14587 25195961 ~ 25197451 (+)
G134610 NA non-coding downstream 36783 25218157 ~ 25573608 (+)
G134630 haus7 non-coding downstream 130556 25311930 ~ 25317411 (+)
trnae-uuc_18 NA other upstream 365018 24810929 ~ 24811000 (+)
LOC103036968 LOC108436332 other upstream 514484 24605649 ~ 24661534 (+)
G134426 NA other upstream 543888 24621908 ~ 24632130 (+)
LOC103040021 trpc4ap,emp3b,LOC107741324,LOC107656986,LOC107562468,LOC108436335,LOC107741326,LOC107562456,LOC107657024,LOC107671979,LOC107737636,LOC107560919 other upstream 673008 24489905 ~ 24503010 (+)
LOC103040548 myh7b,myh7bb,LOC107672010,LOC107737633,LOC107657025,LOC107741323,LOC107562469,LOC107560867 other upstream 695646 24457876 ~ 24480372 (+)
smim4 smim4 other downstream 4442 25185816 ~ 25190306 (+)
LOC103026913 flna,LOC108436314,LOC101154674 other downstream 56097 25237471 ~ 25296336 (+)
emd LOC108436312 other downstream 119407 25300781 ~ 25306348 (+)
G134632 atp2b3 other downstream 138767 25320141 ~ 25324699 (+)
cfap126 cfap126 other downstream 245360 25426734 ~ 25431174 (+)

Expression


Co-expression Network