Gene
RNA
| Item | Value |
|---|---|
| gene id | G148407 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035913.1 |
| NCBI id | CM008316.1 |
| chromosome length | 28317440 |
| location | 977029 ~ 981096 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU200869 | False | 436 | lncRNA | 0.49 | 2 | 978876 | 981096 |
| TU200870 | True | 462 | lncRNA | 0.49 | 3 | 977029 | 981096 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhx8 | lhx8,lhx8a,LOC108436043,LOC107693563 | coding | upstream | 280334 | 680199 ~ 696695 (+) |
| tyw3 | NA | coding | upstream | 360676 | 611239 ~ 616353 (+) |
| acot11 | acot11 | coding | upstream | 407590 | 541500 ~ 569439 (+) |
| mrpl37 | mrpl37 | coding | upstream | 505912 | 458776 ~ 471117 (+) |
| tceanc2 | tceanc2 | coding | upstream | 530361 | 440863 ~ 446668 (+) |
| trnav-aac_10 | NA | coding | downstream | 1598 | 982694 ~ 982766 (+) |
| LOC103028630 | NA | coding | downstream | 9988 | 991084 ~ 1053935 (+) |
| LOC103022131 | LOC108280703 | coding | downstream | 140919 | 1122015 ~ 1192644 (+) |
| LOC103027172 | NA | coding | downstream | 420927 | 1402023 ~ 1413005 (+) |
| LOC107197232 | LOC108436029 | coding | downstream | 466359 | 1447455 ~ 1460722 (+) |
| G148397 | NA | non-coding | upstream | 8903 | 966069 ~ 968126 (+) |
| G148399 | impad1 | non-coding | upstream | 21178 | 952436 ~ 955851 (+) |
| G148381 | NA | non-coding | upstream | 233238 | 741559 ~ 743791 (+) |
| G148348 | ssbp3 | non-coding | upstream | 437805 | 492284 ~ 539224 (+) |
| G148339 | NA | non-coding | upstream | 502834 | 473221 ~ 474195 (+) |
| G148426 | NA | non-coding | downstream | 105710 | 1086806 ~ 1142532 (+) |
| G148435 | NA | non-coding | downstream | 168980 | 1150076 ~ 1207563 (+) |
| G148438 | NA | non-coding | downstream | 212224 | 1193320 ~ 1277042 (+) |
| G148441 | NA | non-coding | downstream | 218814 | 1199910 ~ 1204754 (+) |
| G148445 | cwc25,LOC107562839,LOC107572154,LOC106587943 | non-coding | downstream | 234372 | 1215468 ~ 1218436 (+) |
| LOC103021490 | LOC103021490 | other | downstream | 213439 | 1194535 ~ 1197577 (+) |
| G148442 | NA | other | downstream | 219189 | 1200285 ~ 1205400 (+) |
| LOC103032064 | LOC108440872,LOC107705307,LOC107653521,LOC107660320 | other | downstream | 1022503 | 2003599 ~ 2193725 (+) |
| G148599 | NA | other | downstream | 1131577 | 2112673 ~ 2114465 (+) |
| tnk2 | tnk2 | other | downstream | 1312536 | 2293632 ~ 2403354 (+) |
