G148438


Basic Information

Item Value
gene id G148438
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 1193320 ~ 1277042 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU200912
tagtttcccggccaaaacgggagacttgacaggtatggttgtaagcgctcgcgctagccgcaaaatacggcagaaaacactgagggagctgcagaattatgaatgggactagaatatgagcacgaggagatcaaagagaaccttcacctgtgagtagttctcaccagaacacgcaaatctctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200912 True 201 lncRNA 0.49 2 1193320 1277042

Neighbor

gene id symbol gene type direction distance location
LOC103022131 LOC108280703 coding upstream 676 1122015 ~ 1192644 (+)
LOC103028630 NA coding upstream 139385 991084 ~ 1053935 (+)
trnav-aac_10 NA coding upstream 210554 982694 ~ 982766 (+)
lhx8 lhx8,lhx8a,LOC108436043,LOC107693563 coding upstream 496625 680199 ~ 696695 (+)
tyw3 NA coding upstream 576967 611239 ~ 616353 (+)
LOC103027172 NA coding downstream 124981 1402023 ~ 1413005 (+)
LOC107197232 LOC108436029 coding downstream 170413 1447455 ~ 1460722 (+)
LOC103026285 saga,LOC108440874,LOC108280708 coding downstream 187615 1464657 ~ 1481526 (+)
proc LOC108440860,LOC108440861 coding downstream 246559 1523601 ~ 1535483 (+)
LOC103025667 wdr33,LOC107695163 coding downstream 275753 1552795 ~ 1592500 (+)
G148426 NA non-coding upstream 50788 1086806 ~ 1142532 (+)
G148407 NA non-coding upstream 212224 977029 ~ 981096 (+)
G148397 NA non-coding upstream 225194 966069 ~ 968126 (+)
G148399 impad1 non-coding upstream 237469 952436 ~ 955851 (+)
G148381 NA non-coding upstream 449529 741559 ~ 743791 (+)
G148466 NA non-coding downstream 61233 1338275 ~ 1339030 (+)
G148465 NA non-coding downstream 62852 1339894 ~ 1340498 (+)
G148487 NA non-coding downstream 191610 1468652 ~ 1470443 (+)
G148489 NA non-coding downstream 197422 1474464 ~ 1553513 (+)
G148491 NA non-coding downstream 209358 1486400 ~ 1492989 (+)
LOC103032064 LOC108440872,LOC107705307,LOC107653521,LOC107660320 other downstream 726557 2003599 ~ 2193725 (+)
G148599 NA other downstream 835631 2112673 ~ 2114465 (+)
tnk2 tnk2 other downstream 1016590 2293632 ~ 2403354 (+)
LOC103027938 NA other downstream 1717164 2994206 ~ 3010066 (+)
G149226 NA other downstream 2714768 3991810 ~ 4009735 (+)

Expression


Co-expression Network