Gene
RNA
| Item | Value |
|---|---|
| gene id | G148490 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035913.1 |
| NCBI id | CM008316.1 |
| chromosome length | 28317440 |
| location | 1490482 ~ 1498333 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU200985 | True | 382 | lncRNA | 0.41 | 3 | 1490482 | 1498333 |
| TU200986 | False | 382 | lncRNA | 0.41 | 4 | 1490482 | 1498333 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103026285 | saga,LOC108440874,LOC108280708 | coding | upstream | 8956 | 1464657 ~ 1481526 (+) |
| LOC107197232 | LOC108436029 | coding | upstream | 29760 | 1447455 ~ 1460722 (+) |
| LOC103027172 | NA | coding | upstream | 77477 | 1402023 ~ 1413005 (+) |
| LOC103022131 | LOC108280703 | coding | upstream | 297838 | 1122015 ~ 1192644 (+) |
| LOC103028630 | NA | coding | upstream | 436547 | 991084 ~ 1053935 (+) |
| proc | LOC108440860,LOC108440861 | coding | downstream | 25268 | 1523601 ~ 1535483 (+) |
| LOC103025667 | wdr33,LOC107695163 | coding | downstream | 54462 | 1552795 ~ 1592500 (+) |
| LOC103034819 | LOC108440876 | coding | downstream | 140976 | 1639309 ~ 1671242 (+) |
| LOC103035142 | phb2a,phb2,LOC108440869,LOC107653518,LOC100703857,LOC107564245,LOC101465856,LOC107705310 | coding | downstream | 368790 | 1867123 ~ 1886581 (+) |
| LOC111194472 | NA | coding | downstream | 399140 | 1897473 ~ 1902454 (+) |
| G148492 | NA | non-coding | upstream | 926 | 1486887 ~ 1489556 (+) |
| G148487 | NA | non-coding | upstream | 20039 | 1468652 ~ 1470443 (+) |
| G148465 | NA | non-coding | upstream | 149984 | 1339894 ~ 1340498 (+) |
| G148466 | NA | non-coding | upstream | 151452 | 1338275 ~ 1339030 (+) |
| G148455 | NA | non-coding | upstream | 229411 | 1259085 ~ 1261071 (+) |
| G148498 | NA | non-coding | downstream | 10099 | 1508432 ~ 1511769 (+) |
| G148506 | NA | non-coding | downstream | 83019 | 1581352 ~ 1584025 (+) |
| G148507 | NA | non-coding | downstream | 90824 | 1589157 ~ 1589608 (+) |
| G148521 | NA | non-coding | downstream | 134727 | 1633060 ~ 1634757 (+) |
| G148523 | NA | non-coding | downstream | 185125 | 1683458 ~ 1688461 (+) |
| G148442 | NA | other | upstream | 285082 | 1200285 ~ 1205400 (+) |
| LOC103021490 | LOC103021490 | other | upstream | 292905 | 1194535 ~ 1197577 (+) |
| LOC103032064 | LOC108440872,LOC107705307,LOC107653521,LOC107660320 | other | downstream | 505266 | 2003599 ~ 2193725 (+) |
| G148599 | NA | other | downstream | 614340 | 2112673 ~ 2114465 (+) |
| tnk2 | tnk2 | other | downstream | 795299 | 2293632 ~ 2403354 (+) |
| LOC103027938 | NA | other | downstream | 1495873 | 2994206 ~ 3010066 (+) |
| G149226 | NA | other | downstream | 2493477 | 3991810 ~ 4009735 (+) |
