G148491


Basic Information

Item Value
gene id G148491
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 1486400 ~ 1492989 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU200987
ttagcaaccaccctggataccatagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccacctagcaacaccttagcaaccacctagcaaccacctagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccacctagcaacaccttagcaaccacctagcaaccacttagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccacctagcaaccacttagcaaccacctagcaaccacctagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccacctagcaacaccttagcaaccacctagaaacaccttagcaaccacccaggataccatagcaacacctagcaacaccttagcaaccacctagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccgcctagcaacaccttagcaaccacctagcaacaccttagcaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200987 True 550 lncRNA 0.50 3 1486400 1492989

Neighbor

gene id symbol gene type direction distance location
LOC103026285 saga,LOC108440874,LOC108280708 coding upstream 4874 1464657 ~ 1481526 (+)
LOC107197232 LOC108436029 coding upstream 25678 1447455 ~ 1460722 (+)
LOC103027172 NA coding upstream 73395 1402023 ~ 1413005 (+)
LOC103022131 LOC108280703 coding upstream 293756 1122015 ~ 1192644 (+)
LOC103028630 NA coding upstream 432465 991084 ~ 1053935 (+)
proc LOC108440860,LOC108440861 coding downstream 30612 1523601 ~ 1535483 (+)
LOC103025667 wdr33,LOC107695163 coding downstream 59806 1552795 ~ 1592500 (+)
LOC103034819 LOC108440876 coding downstream 146320 1639309 ~ 1671242 (+)
LOC103035142 phb2a,phb2,LOC108440869,LOC107653518,LOC100703857,LOC107564245,LOC101465856,LOC107705310 coding downstream 374134 1867123 ~ 1886581 (+)
LOC111194472 NA coding downstream 404484 1897473 ~ 1902454 (+)
G148487 NA non-coding upstream 15957 1468652 ~ 1470443 (+)
G148465 NA non-coding upstream 145902 1339894 ~ 1340498 (+)
G148466 NA non-coding upstream 147370 1338275 ~ 1339030 (+)
G148455 NA non-coding upstream 225329 1259085 ~ 1261071 (+)
G148445 cwc25,LOC107562839,LOC107572154,LOC106587943 non-coding upstream 267964 1215468 ~ 1218436 (+)
G148498 NA non-coding downstream 15443 1508432 ~ 1511769 (+)
G148506 NA non-coding downstream 88363 1581352 ~ 1584025 (+)
G148507 NA non-coding downstream 96168 1589157 ~ 1589608 (+)
G148521 NA non-coding downstream 140071 1633060 ~ 1634757 (+)
G148523 NA non-coding downstream 190469 1683458 ~ 1688461 (+)
G148442 NA other upstream 281000 1200285 ~ 1205400 (+)
LOC103021490 LOC103021490 other upstream 288823 1194535 ~ 1197577 (+)
LOC103032064 LOC108440872,LOC107705307,LOC107653521,LOC107660320 other downstream 510610 2003599 ~ 2193725 (+)
G148599 NA other downstream 619684 2112673 ~ 2114465 (+)
tnk2 tnk2 other downstream 800643 2293632 ~ 2403354 (+)
LOC103027938 NA other downstream 1501217 2994206 ~ 3010066 (+)
G149226 NA other downstream 2498821 3991810 ~ 4009735 (+)

Expression


Co-expression Network