G148492


Basic Information

Item Value
gene id G148492
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 1486887 ~ 1489556 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU200988
cttagcaaccaccctggataccatagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccacctagcaaccacttagcaaccacctagcaaccccttagcaaccaccctggataccatagcaacaccttagcaaccacctagcaaccacctagcaaccacttagcaacaccttagcaaccaccccggataccatagcaacaccttagcaaccacctagcaaccacctagcaacaccttagcaaccacctagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccacctagcaacaccttagcaaccaccccggataccatagcaacaccttagcaaccatctagcaacaccttagcaaccaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200988 True 393 lncRNA 0.51 2 1486887 1489556

Neighbor

gene id symbol gene type direction distance location
LOC103026285 saga,LOC108440874,LOC108280708 coding upstream 5361 1464657 ~ 1481526 (+)
LOC107197232 LOC108436029 coding upstream 26165 1447455 ~ 1460722 (+)
LOC103027172 NA coding upstream 73882 1402023 ~ 1413005 (+)
LOC103022131 LOC108280703 coding upstream 294243 1122015 ~ 1192644 (+)
LOC103028630 NA coding upstream 432952 991084 ~ 1053935 (+)
proc LOC108440860,LOC108440861 coding downstream 34045 1523601 ~ 1535483 (+)
LOC103025667 wdr33,LOC107695163 coding downstream 63239 1552795 ~ 1592500 (+)
LOC103034819 LOC108440876 coding downstream 149753 1639309 ~ 1671242 (+)
LOC103035142 phb2a,phb2,LOC108440869,LOC107653518,LOC100703857,LOC107564245,LOC101465856,LOC107705310 coding downstream 377567 1867123 ~ 1886581 (+)
LOC111194472 NA coding downstream 407917 1897473 ~ 1902454 (+)
G148487 NA non-coding upstream 16444 1468652 ~ 1470443 (+)
G148465 NA non-coding upstream 146389 1339894 ~ 1340498 (+)
G148466 NA non-coding upstream 147857 1338275 ~ 1339030 (+)
G148455 NA non-coding upstream 225816 1259085 ~ 1261071 (+)
G148445 cwc25,LOC107562839,LOC107572154,LOC106587943 non-coding upstream 268451 1215468 ~ 1218436 (+)
G148490 NA non-coding downstream 926 1490482 ~ 1498333 (+)
G148498 NA non-coding downstream 18876 1508432 ~ 1511769 (+)
G148506 NA non-coding downstream 91796 1581352 ~ 1584025 (+)
G148507 NA non-coding downstream 99601 1589157 ~ 1589608 (+)
G148521 NA non-coding downstream 143504 1633060 ~ 1634757 (+)
G148442 NA other upstream 281487 1200285 ~ 1205400 (+)
LOC103021490 LOC103021490 other upstream 289310 1194535 ~ 1197577 (+)
LOC103032064 LOC108440872,LOC107705307,LOC107653521,LOC107660320 other downstream 514043 2003599 ~ 2193725 (+)
G148599 NA other downstream 623117 2112673 ~ 2114465 (+)
tnk2 tnk2 other downstream 804076 2293632 ~ 2403354 (+)
LOC103027938 NA other downstream 1504650 2994206 ~ 3010066 (+)
G149226 NA other downstream 2502254 3991810 ~ 4009735 (+)

Expression


Co-expression Network