G148571


Basic Information

Item Value
gene id G148571
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 2135450 ~ 2189287 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU201092
ctatgaatgaacacatgtggagttttatgtacttaacaaaaaaaaggtgaaataactaaaaaaaaaacatgttttatattctagtttcttcaaaaaaccctccctttgctctgattactgctttacacactcttggcatcgtcattctctcaatgagcttcattaagaggtggccacctgaaatgaaaagttttccaacagtcttgaaggaaggaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201092 True 218 lncRNA 0.35 2 2135450 2189287

Neighbor

gene id symbol gene type direction distance location
LOC103031003 NA coding upstream 174905 1956162 ~ 1960545 (+)
LOC111194472 NA coding upstream 232996 1897473 ~ 1902454 (+)
LOC103035142 phb2a,phb2,LOC108440869,LOC107653518,LOC100703857,LOC107564245,LOC101465856,LOC107705310 coding upstream 248869 1867123 ~ 1886581 (+)
LOC103034819 LOC108440876 coding upstream 464208 1639309 ~ 1671242 (+)
LOC103025667 wdr33,LOC107695163 coding upstream 542950 1552795 ~ 1592500 (+)
LOC103035460 NA coding downstream 39239 2228526 ~ 2261643 (+)
LOC103030361 LOC108430157 coding downstream 608575 2797862 ~ 2891311 (+)
LOC103027018 LOC108430159 coding downstream 748014 2937301 ~ 2967577 (+)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding downstream 839096 3028383 ~ 3139358 (+)
gata6 gata6 coding downstream 1009498 3198785 ~ 3207918 (+)
G148606 NA non-coding upstream 1356 2132945 ~ 2134094 (+)
G148605 NA non-coding upstream 6718 2126045 ~ 2128732 (+)
G148602 NA non-coding upstream 15331 2118680 ~ 2120119 (+)
G148594 NA non-coding upstream 42353 2092055 ~ 2093097 (+)
G148593 NA non-coding upstream 42606 2090353 ~ 2092844 (+)
G148608 NA non-coding downstream 23278 2212565 ~ 2266924 (+)
G148610 NA non-coding downstream 59054 2248341 ~ 2250594 (+)
G148618 NA non-coding downstream 175338 2364625 ~ 2367099 (+)
G148619 NA non-coding downstream 176621 2365908 ~ 2366671 (+)
G148621 NA non-coding downstream 208788 2398075 ~ 2398729 (+)
G148599 NA other upstream 20985 2112673 ~ 2114465 (+)
G148442 NA other upstream 930050 1200285 ~ 1205400 (+)
LOC103021490 LOC103021490 other upstream 937873 1194535 ~ 1197577 (+)
tnk2 tnk2 other downstream 104345 2293632 ~ 2403354 (+)
LOC103027938 NA other downstream 804919 2994206 ~ 3010066 (+)
G149226 NA other downstream 1802523 3991810 ~ 4009735 (+)
G149243 cul1,LOC108280768,LOC108433080,LOC105024245 other downstream 1937662 4126949 ~ 4131384 (+)
G149256 NA other downstream 1969913 4159200 ~ 4160106 (+)

Expression


Co-expression Network