G148586


Basic Information

Item Value
gene id G148586
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 2067602 ~ 2067891 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU201107
atgggaattggcctaagtcgcttgtgccaacaccctagTTGTCAAGTGTAATGTATGTGCCACTACCCAGGTTGCCGAGTAGAATATGGGAATTAGCCCTAGCCGCTCGTGCCTACATCCCAGTTACTGAGTAGAATATGGGATTGGACCCAAGCCAATTGTTGAAACACCCAGGTTTCCAAGTATACTAGTagaatatgggaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201107 True 205 lncRNA 0.46 2 2067602 2067891

Neighbor

gene id symbol gene type direction distance location
LOC103031003 NA coding upstream 107057 1956162 ~ 1960545 (+)
LOC111194472 NA coding upstream 165148 1897473 ~ 1902454 (+)
LOC103035142 phb2a,phb2,LOC108440869,LOC107653518,LOC100703857,LOC107564245,LOC101465856,LOC107705310 coding upstream 181021 1867123 ~ 1886581 (+)
LOC103034819 LOC108440876 coding upstream 396360 1639309 ~ 1671242 (+)
LOC103025667 wdr33,LOC107695163 coding upstream 475102 1552795 ~ 1592500 (+)
LOC103035460 NA coding downstream 160635 2228526 ~ 2261643 (+)
LOC103030361 LOC108430157 coding downstream 729971 2797862 ~ 2891311 (+)
LOC103027018 LOC108430159 coding downstream 869410 2937301 ~ 2967577 (+)
mib1 mib1,LOC107681781,LOC107708480,LOC107550435,LOC107747519 coding downstream 960492 3028383 ~ 3139358 (+)
gata6 gata6 coding downstream 1130894 3198785 ~ 3207918 (+)
G148566 NA non-coding upstream 70011 1997291 ~ 1997591 (+)
G148565 NA non-coding upstream 76826 1990564 ~ 1990776 (+)
LOC111194451 NA non-coding upstream 78211 1983613 ~ 1989391 (+)
G148546 NA non-coding upstream 265297 1797408 ~ 1802305 (+)
G148531 NA non-coding upstream 355146 1697084 ~ 1712456 (+)
G148589 NA non-coding downstream 8715 2076606 ~ 2087733 (+)
G148592 NA non-coding downstream 22057 2089948 ~ 2091693 (+)
G148593 NA non-coding downstream 22462 2090353 ~ 2092844 (+)
G148594 NA non-coding downstream 24164 2092055 ~ 2093097 (+)
G148569 NA non-coding downstream 31029 2098920 ~ 2183951 (+)
G148442 NA other upstream 862202 1200285 ~ 1205400 (+)
LOC103021490 LOC103021490 other upstream 870025 1194535 ~ 1197577 (+)
G148599 NA other downstream 44782 2112673 ~ 2114465 (+)
tnk2 tnk2 other downstream 225741 2293632 ~ 2403354 (+)
LOC103027938 NA other downstream 926315 2994206 ~ 3010066 (+)
G149226 NA other downstream 1923919 3991810 ~ 4009735 (+)
G149243 cul1,LOC108280768,LOC108433080,LOC105024245 other downstream 2059058 4126949 ~ 4131384 (+)

Expression


Co-expression Network