Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000012_05565127_05567009 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 5564939 ~ 5567230 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| id | name | namespace |
|---|---|---|
| GO:0003674 | molecular_function | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000012_05565127_05567009.mRNA | True | 1327 | mRNA | 0.45 | 4 | 5564939 | 5567230 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_05551775_05553851 | NA | coding | upstream | 10576 | 5551683 ~ 5554363 (+) |
| CI01000012_05523886_05527548 | NA | coding | upstream | 36778 | 5523886 ~ 5528161 (+) |
| CI01000012_05495596_05510317 | NA | coding | upstream | 53967 | 5495357 ~ 5510972 (+) |
| CI01000012_05425849_05469157 | PCNX, PCNX1 | coding | upstream | 95782 | 5425849 ~ 5469157 (+) |
| CI01000012_05419501_05424708 | MED6 | coding | upstream | 140113 | 5419501 ~ 5424826 (+) |
| CI01000012_05648602_05650699 | MYCLA | coding | downstream | 81372 | 5648602 ~ 5651197 (+) |
| CI01000012_05659039_05669397 | NA | coding | downstream | 91809 | 5659039 ~ 5669584 (+) |
| CI01000012_05708007_05735678 | MAP3K4 | coding | downstream | 140777 | 5708007 ~ 5735985 (+) |
| CI01000012_05748899_05754466 | ERLEC1 | coding | downstream | 181669 | 5748899 ~ 5755254 (+) |
| CI01000012_05856793_05862577 | NA | coding | downstream | 289086 | 5856316 ~ 5862642 (+) |
| G71548 | NA | non-coding | upstream | 3506 | 5550493 ~ 5561433 (+) |
| G71225 | NA | non-coding | upstream | 153423 | 5409222 ~ 5411516 (+) |
| G71171 | NA | non-coding | upstream | 259366 | 5304404 ~ 5305573 (+) |
| G71529 | NA | non-coding | upstream | 402506 | 5161509 ~ 5162433 (+) |
| G71172 | NA | non-coding | upstream | 424971 | 5137470 ~ 5139968 (+) |
| G71559 | NA | non-coding | downstream | 5587 | 5572817 ~ 5573228 (+) |
| G71562 | NA | non-coding | downstream | 41620 | 5608850 ~ 5611605 (+) |
| G71599 | NA | non-coding | downstream | 70138 | 5637368 ~ 5637671 (+) |
| G71606 | NA | non-coding | downstream | 104524 | 5671754 ~ 5672210 (+) |
| G71607 | NA | non-coding | downstream | 105812 | 5673042 ~ 5673257 (+) |
| G71221 | NA | other | upstream | 24483 | 5538525 ~ 5540456 (+) |
| G71218 | NA | other | upstream | 26555 | 5535852 ~ 5538384 (+) |
| G71199 | NA | other | upstream | 148154 | 5413250 ~ 5416785 (+) |
| CI01000012_05177587_05180517 | SRSF5A | other | upstream | 383969 | 5176895 ~ 5180970 (+) |
| G71623 | NA | other | downstream | 246287 | 5813517 ~ 5816605 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | downstream | 355936 | 5922385 ~ 5929186 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | downstream | 2238873 | 7805248 ~ 7811902 (+) |
| G73578 | NA | other | downstream | 2799576 | 8366806 ~ 8367627 (+) |
| CI01000012_10223957_10235955 | NA | other | downstream | 4654725 | 10223697 ~ 10236276 (+) |
