CI01000012_05568600_05606181



Basic Information


Item Value
gene id CI01000012_05568600_05606181
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5568600 ~ 5606181 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000012_05568600_05606181.mRNA
GTGAATAGCATTACTCGCCTAGTTCTAGGTTCGATTCTTGTCATTTTCTTCAAACCAACATTGCTAAATAGTGCTTTATCTTTATCAGATGAGAGAGTCGATCGCCCACAAACAGCACGCGGGAAACATCTTGGGAAACTTCTAGTGCGCGATTCGTTCACAAACACGCCAGACTTGACGCGCCAGAGATCGGTGCCTGTCCTGCGGATTCGTGGCCAAGCACCTGCGAGGATCCCACCTGGCCAAGATTACCTGCCCGAATTCAACCGCCTCCCGGACGTGTCGGTGACTTGCTCGAGCAAAGGTTTCGTGTTAAGGGTGAAGAAGAGTTTCTACGGTTTCTCGGCCGTCGCAGAGGAGCTGACGCTCGGAGAAACCTGCAAAAGTAACGGGGTCCTTGAGCCGCATGAAGACTTGCTCTTCACATACGCGCTCACGGACTGTCAGGGTCAACAACAGGTGGTTCCTGATTACGTAGTTTACAAGTATGTCCTTCACTACGTGCCGCTATTACACCGAAACCCATTCATTTATCACAGAGTGAATGTGGGCGTGGAGTGTCGCCATAAAAGTCTGATGATAAACCCGACATTGAGGACACCATTGCGCAAAGTCATAAGGAGCAGATCTGGTGACTTTCGGATTCAGCTGATGGACGACTCCTGGTCTTCTCCAGTCAGGTCTGCTGTGTACCTGCTGGGTCAGAATGTGAACGTGCAGATCTCCACTCGACACCATTACCCTGGGGTCAAGCTTTTTATCAACAGCTGTTATGTGGCTACCGTTAACACTTTGAGTCCAGCCACCAAATACAGCATCATAGACAATTACGGGTGTTTACAGGAAAGCCGGATAAATCCAGGTGCTTCAAGATTCAGATTATCCAGGGCAGACAATGTTGTTCAGTTCTCTTTTGGTGCTTTCCAATTCATTGAGGCTCCAGATGCCCAGGTCTCACTCCATTGTGAAGTCTCTATGTCTGGTGGAGGCCCTAGTCCAATGCAGAAGTCATGTTTTTACAGGCACCCAGACAAAAGATGGATCTCTGTGTTTGGGCAAGATTCTGTCTGTGACTGCTGTGACTCAGTCTGCAATCAGACTAAAACCAAACGAATAATTTATGAAGGGTTCGTAAGCAGTGATCAAGTGCTCTTCTCTGACACATCTATGGCTTCCTCAACTTTAAACAGCACTCTCAGGGCTAATAGAAATGATGACACCATCTGGTTTGAAGCCAAACTGGCCAAAGAGCCCCAGAGGTCCTACACACATGAGGACTTTGTTGCCTCTGTTACCCTGATATCTTCTGAAGAGGCCCATGATAAGAGTCAGCTGTCTCGCACCAGCACAGTGGAACTCATAGAGGAGGAAAGGAAAGAGATGGAGGAAGAGAAACATGGGGATGTGGAGATTTTGATGGCTATCAGTAAAAGCTTTAAGGGATTTGAAAGGCTGGATTTAGACGCCACGGAGCCGTTTGATGTTGAATCCTTGGACTGGGCTGGAAAGAGGAAAATGCAGGATATGAATAAGGGTCTGAGTTATTGGCCAAAGACAGTTCAGAGAGTGGGAAGTTCCATGAAGACATCCGTTATGATGTTCAATGAAACCATGGAGCAGCATTCCAAAATAAATGAATCTGCACTGGGTGACTGGAAACTCCATAATGTGTTTCTGTCATCCTTTATCTCAGAGGAAAAAAATAAGGAAGATGTAAATTCTTCTGAAAATAAAAATGAAGGTTTGGATTTCCTGTTAATTGACGTCTCTTCAAACGATGAAGAGTTTCCAGCTGGATCTGATGAGCTGGTGGAGCAGGGTCTTGTGAGAAAACTGGATCTTATGCAAAACTCAGATGATTAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000012_05568600_05606181.mRNA True 1863 mRNA 0.46 8 5568600 5606181

Neighbor


gene id symbol gene type direction distance location
CI01000012_05414096_05416676 TTC9 coding downstream 151924 5413369 ~ 5416780 (-)
CI01000012_05131253_05139664 CNIH1, MGC85215, CNIH1.S coding downstream 428925 5131030 ~ 5139675 (-)
CI01000012_05118797_05123143 NA coding downstream 445457 5118332 ~ 5123143 (-)
CI01000012_05112839_05116264 NA coding downstream 452336 5111405 ~ 5116264 (-)
CI01000012_05091184_05092014 NA coding downstream 476586 5091021 ~ 5092014 (-)
CI01000012_05609848_05631772 NA coding upstream 2652 5608833 ~ 5631932 (-)
CI01000012_05672517_05674075 NA coding upstream 66048 5672229 ~ 5675834 (-)
CI01000012_05680930_05690904 KCNK1B, KCNK1 coding upstream 73856 5680037 ~ 5690904 (-)
CI01000012_05738968_05745791 AGPAT4 coding upstream 132662 5738843 ~ 5745791 (-)
CI01000012_05757115_05758767 GPR75 coding upstream 150818 5756999 ~ 5758977 (-)
G72328 NA non-coding downstream 2372 5539952 ~ 5566228 (-)
G72335 NA non-coding downstream 37705 5530441 ~ 5530895 (-)
G72334 NA non-coding downstream 42577 5525793 ~ 5526023 (-)
G72333 NA non-coding downstream 42916 5525369 ~ 5525684 (-)
G72332 NA non-coding downstream 43468 5524920 ~ 5525132 (-)
G72374 NA non-coding upstream 30973 5637154 ~ 5637745 (-)
G72375 NA non-coding upstream 32873 5639054 ~ 5639355 (-)
G72379 NA non-coding upstream 41467 5647648 ~ 5649127 (-)
G72390 NA non-coding upstream 65431 5671612 ~ 5671971 (-)
G72294 NA other downstream 102743 5462840 ~ 5465857 (-)
G72204 NA other downstream 266394 5293773 ~ 5302206 (-)
G72068 NA other downstream 788468 4776220 ~ 4780132 (-)
G71898 NA other downstream 1033928 4533530 ~ 4534672 (-)
G72629 NA other upstream 540830 6147011 ~ 6147494 (-)
CI01000012_07356934_07358497 NA other upstream 1749071 7356863 ~ 7358612 (-)
G74648 NA other upstream 2658148 8264329 ~ 8265654 (-)
G74701 NA other upstream 2760838 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 3461725 9067906 ~ 9070765 (-)

Expression



Co-expression Network