G149256


Basic Information

Item Value
gene id G149256
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4159200 ~ 4160106 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU202070
GTTTTTCCATGAAAGAAGTTAAATGAACGTAAATGCACAAAGAATCCAGATTACTACAAGAACATAAACTACTACATTAGACAAaaaagtgctgcattaacactgACTGACGCACCGTGGCATGGATGCCAGTCTATTACCATGCTTCTAAATATTTGTAGGACAGTTAGTTTTGAAGACACCagccattaaaaatatatttaaacacaatcaAATGTCATCGTCTGTAACGTAAATATACATATTGTGCTATTGGGGTTGTTGATCACTTTTCTGGCAGTTCTAGAGATATCTGTCCACTGTGTTAACGGCGTAGTTGTGGTACAATCAGAcatgatacaatacaatacaggtTGCTTTGATATTGTATATCGTAGTCCATGGAATGCGGAAAGTACGCCTTCCTACGTACGTACATATGTGCATGAGATGAATTCAGAattcagatttcagatttttGAAAGAAGTCCTTGTGGTACCCATTCATTCACATACAACATCAGTAATTACATCACAGGCCTGCCAGCCAGCCAGCGCGAGTCCGTCAGAGTATGTTTTAGGATTCACTGTGGAATTTCGGAATTTCCTCATCCTCACGCTTCCACtaggtggcgctctctctctgcaAATTCTCTTATTTCCATGTTCTCTGAAGCTCCACGTGACTAAATAAACCACTCCTTCTTGCTCTCGTCGATAGTCTCCGTGAAGGCGGGGTCGTTTACGATGATGGCCGCGTCGGCGCAGTCCGCTGACTCCGCCCCCTTGGCCTCGTTGGTGTGGTAGGACCCCTTGTGGCGGAACATGTGCCGCACCACGAACACCAGCGTGCACAGGATGGTGAAGATGACCACGGCGATGATgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202070 True 865 TUCP 0.44 2 4159200 4160106

Neighbor

gene id symbol gene type direction distance location
LOC103021386 NA coding upstream 35790 4121315 ~ 4123410 (+)
LOC103047776 NA coding upstream 161141 3953403 ~ 3998059 (+)
pter pter coding upstream 476679 3678996 ~ 3682521 (+)
LOC103028887 LOC108430178,LOC108280576,LOC107566471,LOC107691105 coding upstream 526332 3585245 ~ 3632868 (+)
LOC103030995 cables1,LOC108430174 coding upstream 799349 3295980 ~ 3359851 (+)
LOC111194481 LOC108433078 coding downstream 109911 4270017 ~ 4286199 (+)
LOC111194482 NA coding downstream 224753 4384859 ~ 4386588 (+)
LOC111194480 LOC108433077,LOC108280739 coding downstream 276762 4436868 ~ 4477488 (+)
LOC103045023 LOC108433075,LOC108280757 coding downstream 424207 4584313 ~ 4621712 (+)
trnal-uaa_36 NA coding downstream 682363 4842469 ~ 4842550 (+)
G149251 mcm6l,LOC107757789,LOC108280894,LOC108433082,LOC107600254 non-coding upstream 43654 4114171 ~ 4115546 (+)
G149247 NA non-coding upstream 56331 4100946 ~ 4102869 (+)
G149222 NA non-coding upstream 67359 3980794 ~ 4091841 (+)
G149260 NA non-coding downstream 10978 4171084 ~ 4226395 (+)
G149278 NA non-coding downstream 124822 4284928 ~ 4341467 (+)
G149302 NA non-coding downstream 337138 4497244 ~ 4812714 (+)
G149335 NA non-coding downstream 463724 4623830 ~ 4627706 (+)
G149340 NA non-coding downstream 558970 4719076 ~ 4771503 (+)
G149243 cul1,LOC108280768,LOC108433080,LOC105024245 other upstream 27816 4126949 ~ 4131384 (+)
G149226 NA other upstream 149465 3991810 ~ 4009735 (+)
LOC103027938 NA other upstream 1149134 2994206 ~ 3010066 (+)
tnk2 tnk2 other upstream 1755846 2293632 ~ 2403354 (+)
LOC103032064 LOC108440872,LOC107705307,LOC107653521,LOC107660320 other upstream 1965475 2003599 ~ 2193725 (+)
LOC111194484 LOC108433077 other downstream 132377 4292483 ~ 4386634 (+)
LOC103029581 LOC108433065 other downstream 345607 4505713 ~ 4512310 (+)
trnal-uaa_9 NA other downstream 364520 4524626 ~ 4524708 (+)
trnal-uaa_10 NA other downstream 366963 4527069 ~ 4527149 (+)
trnal-uaa_12 NA other downstream 369604 4529710 ~ 4529792 (+)

Expression


Co-expression Network