G149357


Basic Information

Item Value
gene id G149357
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4840115 ~ 4840341 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU202260
cctgctgttcggtttcagaaagctgtgtaaccccacccatccccataggtttcaatggcaaaacagacaattttcaatcacgtttttttctaatatactgtaattctacctcctttatttacatgcagcagctagtgtaacctctgcttatattgtcaaatttttatatccccacataattcgttttttaaaaggttattcagctctattcaaaaaaggtgtggtta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202260 True 227 lncRNA 0.36 1 4840115 4840341

Neighbor

gene id symbol gene type direction distance location
LOC103045023 LOC108433075,LOC108280757 coding upstream 218403 4584313 ~ 4621712 (+)
LOC111194480 LOC108433077,LOC108280739 coding upstream 362627 4436868 ~ 4477488 (+)
LOC111194482 NA coding upstream 453527 4384859 ~ 4386588 (+)
LOC111194481 LOC108433078 coding upstream 553916 4270017 ~ 4286199 (+)
LOC103021386 NA coding upstream 716705 4121315 ~ 4123410 (+)
trnal-uaa_36 NA coding downstream 2128 4842469 ~ 4842550 (+)
trnal-uaa_37 NA coding downstream 2318 4842659 ~ 4842741 (+)
trnal-uaa_38 NA coding downstream 2509 4842850 ~ 4842932 (+)
trnal-uaa_39 NA coding downstream 2699 4843040 ~ 4843122 (+)
trnal-uaa_40 NA coding downstream 2890 4843231 ~ 4843313 (+)
G149302 NA non-coding upstream 27401 4497244 ~ 4812714 (+)
G149340 NA non-coding upstream 68612 4719076 ~ 4771503 (+)
G149335 NA non-coding upstream 212409 4623830 ~ 4627706 (+)
G149278 NA non-coding upstream 498648 4284928 ~ 4341467 (+)
G149260 NA non-coding upstream 613720 4171084 ~ 4226395 (+)
G149366 LOC108410861 non-coding downstream 67076 4907417 ~ 4909831 (+)
G149571 NA non-coding downstream 90472 4930813 ~ 4932837 (+)
G149572 NA non-coding downstream 92623 4932964 ~ 4934234 (+)
G149574 NA non-coding downstream 121749 4962090 ~ 5037794 (+)
G149617 sbds,LOC102193797,LOC102210364 non-coding downstream 383308 5223649 ~ 5226340 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other upstream 75270 4684608 ~ 4764845 (+)
trnal-uaa_35 NA other upstream 280100 4559933 ~ 4560015 (+)
trnal-uaa_34 NA other upstream 280767 4559266 ~ 4559348 (+)
trnal-uaa_33 NA other upstream 281050 4558983 ~ 4559065 (+)
trnal-uaa_32 NA other upstream 281558 4558475 ~ 4558557 (+)
G149595 NA other downstream 250641 5090982 ~ 5102358 (+)
LOC111194607 NA other downstream 270983 5111324 ~ 5114716 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other downstream 355800 5196141 ~ 5199985 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other downstream 387577 5227918 ~ 5258861 (+)
G149754 NA other downstream 884928 5725269 ~ 5727420 (+)

Expression


Co-expression Network