G149572


Basic Information

Item Value
gene id G149572
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4932964 ~ 4934234 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU202560
ggcagttgctaacattttccaggtggttgctaagtggttgctaggtagttgctaacatattccaggtggttgctaggcagctgctaagtggttgctaggcagttgctaacgttttccaggtggttgctaagtggttgttaggcagttgctaacgttttccaggtggttgctaggcagttgctaagtggttgctaggcagttgctaacgttttccaagtggttgctaggcagttgctaagtggttgctaggcagttgctaacgttttccaggtggttgctaagtggttgctaggcagttgctaacgttttccaggtggttgctaaggtggttgctaagcagttaataggtggttgctaagccttggctggggtgccggggtgtccaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202560 True 388 lncRNA 0.49 2 4932964 4934234

Neighbor

gene id symbol gene type direction distance location
LOC103027894 LOC108410862,LOC108280684 coding upstream 56576 4849153 ~ 4876388 (+)
trnal-uaa_58 NA coding upstream 85228 4847655 ~ 4847736 (+)
trnal-uaa_57 NA coding upstream 85418 4847465 ~ 4847546 (+)
trnal-uaa_56 NA coding upstream 85608 4847275 ~ 4847356 (+)
trnal-uaa_55 NA coding upstream 85798 4847084 ~ 4847166 (+)
lrrc24 lrrc24,LOC107713676,LOC107655866,LOC107600207 coding downstream 40045 4974279 ~ 5051755 (+)
LOC111194608 NA coding downstream 206148 5140382 ~ 5143020 (+)
LOC111194609 NA coding downstream 218331 5152565 ~ 5165963 (+)
LOC111194490 LOC108424092,LOC108280904 coding downstream 237032 5171266 ~ 5172421 (+)
LOC111194491 LOC108424027 coding downstream 252604 5186838 ~ 5188742 (+)
G149571 NA non-coding upstream 127 4930813 ~ 4932837 (+)
G149366 LOC108410861 non-coding upstream 23133 4907417 ~ 4909831 (+)
G149357 NA non-coding upstream 92623 4840115 ~ 4840341 (+)
G149302 NA non-coding upstream 120250 4497244 ~ 4812714 (+)
G149574 NA non-coding downstream 27856 4962090 ~ 5037794 (+)
G149617 sbds,LOC102193797,LOC102210364 non-coding downstream 289415 5223649 ~ 5226340 (+)
G149635 NA non-coding downstream 410610 5344844 ~ 5345434 (+)
G149644 NA non-coding downstream 438775 5373009 ~ 5375260 (+)
G149652 NA non-coding downstream 491658 5425892 ~ 5508053 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other upstream 168119 4684608 ~ 4764845 (+)
trnal-uaa_35 NA other upstream 372949 4559933 ~ 4560015 (+)
trnal-uaa_34 NA other upstream 373616 4559266 ~ 4559348 (+)
trnal-uaa_33 NA other upstream 373899 4558983 ~ 4559065 (+)
trnal-uaa_32 NA other upstream 374407 4558475 ~ 4558557 (+)
G149595 NA other downstream 156748 5090982 ~ 5102358 (+)
LOC111194607 NA other downstream 177090 5111324 ~ 5114716 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other downstream 261907 5196141 ~ 5199985 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other downstream 293684 5227918 ~ 5258861 (+)
G149754 NA other downstream 791035 5725269 ~ 5727420 (+)

Expression


Co-expression Network