G149574


Basic Information

Item Value
gene id G149574
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 4962090 ~ 5037794 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU202562
gtttctttgttacttgttatttatttattaaattattatttattgatttcaccctacctgcacttgtgtccgctttcctcgtcaccctgcctgggtattcctgACAATTAGTGTGGGCAGCAtgccaagttctgctggaaaatgaaatcctcatctccataaaagttgtcagtagcagagggaagcatgaagtgctgtaagattttgtgggaaaagactttagacttgataataaaacacagtggatcaacaccagcagatgacatggatttcattttccagcaggacttggcacactgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202562 True 300 lncRNA 0.40 2 4962090 5037794

Neighbor

gene id symbol gene type direction distance location
LOC103027894 LOC108410862,LOC108280684 coding upstream 85702 4849153 ~ 4876388 (+)
trnal-uaa_58 NA coding upstream 114354 4847655 ~ 4847736 (+)
trnal-uaa_57 NA coding upstream 114544 4847465 ~ 4847546 (+)
trnal-uaa_56 NA coding upstream 114734 4847275 ~ 4847356 (+)
trnal-uaa_55 NA coding upstream 114924 4847084 ~ 4847166 (+)
LOC111194608 NA coding downstream 102588 5140382 ~ 5143020 (+)
LOC111194609 NA coding downstream 114771 5152565 ~ 5165963 (+)
LOC111194490 LOC108424092,LOC108280904 coding downstream 133472 5171266 ~ 5172421 (+)
LOC111194491 LOC108424027 coding downstream 149044 5186838 ~ 5188742 (+)
LOC103032323 LOC108424026 coding downstream 155031 5192825 ~ 5194089 (+)
G149572 NA non-coding upstream 27856 4932964 ~ 4934234 (+)
G149571 NA non-coding upstream 29253 4930813 ~ 4932837 (+)
G149366 LOC108410861 non-coding upstream 52259 4907417 ~ 4909831 (+)
G149357 NA non-coding upstream 121749 4840115 ~ 4840341 (+)
G149340 NA non-coding upstream 190587 4719076 ~ 4771503 (+)
G149617 sbds,LOC102193797,LOC102210364 non-coding downstream 185855 5223649 ~ 5226340 (+)
G149635 NA non-coding downstream 307050 5344844 ~ 5345434 (+)
G149644 NA non-coding downstream 335215 5373009 ~ 5375260 (+)
G149652 NA non-coding downstream 388098 5425892 ~ 5508053 (+)
G149757 NA non-coding downstream 749131 5786925 ~ 5816467 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other upstream 197245 4684608 ~ 4764845 (+)
trnal-uaa_35 NA other upstream 402075 4559933 ~ 4560015 (+)
trnal-uaa_34 NA other upstream 402742 4559266 ~ 4559348 (+)
trnal-uaa_33 NA other upstream 403025 4558983 ~ 4559065 (+)
trnal-uaa_32 NA other upstream 403533 4558475 ~ 4558557 (+)
G149595 NA other downstream 53188 5090982 ~ 5102358 (+)
LOC111194607 NA other downstream 73530 5111324 ~ 5114716 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other downstream 158347 5196141 ~ 5199985 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other downstream 190124 5227918 ~ 5258861 (+)
G149754 NA other downstream 687475 5725269 ~ 5727420 (+)

Expression


Co-expression Network