G149595


Basic Information

Item Value
gene id G149595
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 5090982 ~ 5102358 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU202584
CAAAATTATATGAAAATCTCCTTTGATGTAGACAGTTTCACAAACAAGCAATGCTGGCTAACTCATAGCACATGTCTTCTCTCACTACAGTAATGAAAAGTCCATGTTGATCTGGGTTCTGGTGGCTGTAGGTCTGGGGCTGCTCTTCCTCCTGATCATCATTATTATCTTTATGGCAAGAAAGCAAAAAGGAAATCAGATGGAGGCCACAGACCCTGCAGTTCCCATGAGCTCTGCAATTGAAGACCTTCAGTCCAGTTGTCCAGTCTACAGCAGTGTAGTTCATAAAAAGAAGCGTCAGCCTTCATCTGAAGCAGCTTCTGCAAACGATGTGGTCTACAGCACTGTAGCTCATCAGAAGAAGCCTTCATCTGAACCAGCTtctgcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202584 True 390 TUCP 0.44 5 5090982 5102358

Neighbor

gene id symbol gene type direction distance location
lrrc24 lrrc24,LOC107713676,LOC107655866,LOC107600207 coding upstream 39227 4974279 ~ 5051755 (+)
LOC103027894 LOC108410862,LOC108280684 coding upstream 214594 4849153 ~ 4876388 (+)
trnal-uaa_58 NA coding upstream 243246 4847655 ~ 4847736 (+)
trnal-uaa_57 NA coding upstream 243436 4847465 ~ 4847546 (+)
trnal-uaa_56 NA coding upstream 243626 4847275 ~ 4847356 (+)
LOC111194608 NA coding downstream 38024 5140382 ~ 5143020 (+)
LOC111194609 NA coding downstream 50207 5152565 ~ 5165963 (+)
LOC111194490 LOC108424092,LOC108280904 coding downstream 68908 5171266 ~ 5172421 (+)
LOC111194491 LOC108424027 coding downstream 84480 5186838 ~ 5188742 (+)
LOC103032323 LOC108424026 coding downstream 90467 5192825 ~ 5194089 (+)
G149574 NA non-coding upstream 53188 4962090 ~ 5037794 (+)
G149572 NA non-coding upstream 156748 4932964 ~ 4934234 (+)
G149571 NA non-coding upstream 158145 4930813 ~ 4932837 (+)
G149366 LOC108410861 non-coding upstream 181151 4907417 ~ 4909831 (+)
G149357 NA non-coding upstream 250641 4840115 ~ 4840341 (+)
G149617 sbds,LOC102193797,LOC102210364 non-coding downstream 121291 5223649 ~ 5226340 (+)
G149635 NA non-coding downstream 242486 5344844 ~ 5345434 (+)
G149644 NA non-coding downstream 270651 5373009 ~ 5375260 (+)
G149652 NA non-coding downstream 323534 5425892 ~ 5508053 (+)
G149757 NA non-coding downstream 684567 5786925 ~ 5816467 (+)
LOC111194485 adcyap1r1a,LOC108433074,LOC107600211,LOC107663529,LOC108280208,LOC107713631,LOC107655870 other upstream 326137 4684608 ~ 4764845 (+)
trnal-uaa_35 NA other upstream 530967 4559933 ~ 4560015 (+)
trnal-uaa_34 NA other upstream 531634 4559266 ~ 4559348 (+)
trnal-uaa_33 NA other upstream 531917 4558983 ~ 4559065 (+)
trnal-uaa_32 NA other upstream 532425 4558475 ~ 4558557 (+)
LOC111194607 NA other downstream 8966 5111324 ~ 5114716 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other downstream 93783 5196141 ~ 5199985 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other downstream 125560 5227918 ~ 5258861 (+)
G149754 NA other downstream 622911 5725269 ~ 5727420 (+)
c17h3orf80 NA other downstream 1480688 6583046 ~ 6586369 (+)

Expression


Co-expression Network