G149766


Basic Information

Item Value
gene id G149766
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 5954405 ~ 5959940 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU202856
CCTCAGTTCTTGCCTGGTGGACTTTGGAGAAGGACAGCTGTCTGAAGGGGGTTCCATACAGAGTGTTGAGGTAGTACCGGACTGCATGAGCTGCTCTCTGAGCTTCATAGTGGTCTGGATTGAGTTCTGTGGAGGTCATGACTAAGGGATCCTGAGCCtCTCAGAAGTTGATCTGTTGCTGTATATCAGTAAAACACAGTTGGAGGGGCATTCCACCTCGTCCTGAGCTGTGGAGCCTGGGGCTGTAGGTGATGGGGTGCTGGGAGCCGCAGGACACTGCCAAACCATTGAGAAGAGAACCGTCCAAACAAAGCAGAACCAATTCATATTCAGAGAAGAGCAGGGCAGGCCTGAGGGAGCTCTGAAGACAAACTGTGCTGAACCTGGAGGAGGAATGTACTGAGCTAAATGGACAGTTGCACAAGTACAGAATGAGAGGAGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202856 True 445 lncRNA 0.51 2 5954405 5959940

Neighbor

gene id symbol gene type direction distance location
gfm1 gfm1 coding upstream 5002 5935188 ~ 5949403 (+)
mlf1 NA coding upstream 21582 5915599 ~ 5932823 (+)
rsrc1 rsrc1,LOC108424082 coding upstream 41576 5691835 ~ 5912829 (+)
LOC103043150 LOC108424020,LOC108280635 coding upstream 610335 5333871 ~ 5344070 (+)
mmp28 mmp28 coding upstream 649486 5273915 ~ 5304919 (+)
LOC111194497 NA coding downstream 4836 5964776 ~ 5965375 (+)
mfsd1 mfsd1,LOC106580941 coding downstream 22470 5982410 ~ 6002460 (+)
LOC103045401 schip1,LOC108424074,LOC105909745,LOC108280660,LOC101468843,LOC107750091,LOC107551285,LOC102778146,LOC103369651,LOC106580942,LOC100701131,LOC107081925,LOC108240933,LOC103148079,LOC106612913,LOC102193686 coding downstream 45926 6005866 ~ 6500956 (+)
LOC103025849 NA coding downstream 544213 6504153 ~ 6520788 (+)
trnat-agu_4 NA coding downstream 586764 6546704 ~ 6546777 (+)
G149760 NA non-coding upstream 4064 5949851 ~ 5950341 (+)
G149757 NA non-coding upstream 137938 5786925 ~ 5816467 (+)
G149652 NA non-coding upstream 446352 5425892 ~ 5508053 (+)
G149644 NA non-coding upstream 579145 5373009 ~ 5375260 (+)
G149635 NA non-coding upstream 608971 5344844 ~ 5345434 (+)
G149768 NA non-coding downstream 6220 5966160 ~ 5966431 (+)
LOC111194498 NA non-coding downstream 9693 5969633 ~ 5973852 (+)
G149800 NA non-coding downstream 503161 6463101 ~ 6464880 (+)
G149934 NA non-coding downstream 781586 6741526 ~ 6745025 (+)
G149938 kpna4 non-coding downstream 793078 6753018 ~ 6763106 (+)
G149754 NA other upstream 226985 5725269 ~ 5727420 (+)
LOC103023972 porb,LOC108424088,LOC108280677,LOC106580677,LOC106612446,LOC107728227 other upstream 695544 5227918 ~ 5258861 (+)
LOC103032635 LOC103032635,LOC108424091,LOC107680074,LOC107703976 other upstream 754420 5196141 ~ 5199985 (+)
LOC111194607 NA other upstream 839689 5111324 ~ 5114716 (+)
G149595 NA other upstream 852047 5090982 ~ 5102358 (+)
c17h3orf80 NA other downstream 623106 6583046 ~ 6586369 (+)
G149984 LOC108444119,LOC108444125,LOC108412201,LOC108416439 other downstream 975401 6935341 ~ 6947936 (+)
LOC111194506 NA other downstream 1289225 7249165 ~ 7251366 (+)
G150099 NA other downstream 1809744 7769684 ~ 7805254 (+)
G150131 NA other downstream 1914700 7874640 ~ 7879301 (+)

Expression


Co-expression Network