CI01000012_05873142_05884821


Basic Information

Item Value
gene id CI01000012_05873142_05884821
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5872644 ~ 5884821 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_05873142_05884821.mRNA
TGTATCAGATATCGTCTTGGCAGCTGGTGCTGACCGTACCATCCAGGTGTTCGATATGAACCAGGGCTGTATGGCCACTCAGATCCCTGATGCCCACTGTAGAGCTGTCCACCACCTCACACAGAACAAGTTTGGCACTCCCATCCTCCCATTATATAAGGCCTTTCTGAACGTTATGCAAGATATGATGTCTTCTTCTTTGAAGGATAAAAGTTCATCGTTTAGTTGGGATAATCCAAACCACAGTTGTGTGAGGTTTTCCAAGGGGTCACCATTCTGTACACAGGCCCTGGAATCGTACAATCTCTTCCTGAGCAGTGCTGTAACAGACGGTCTGAAATTGTGGGACCTGCGCACAGCAAGGTGTGTTCGCCGCTATGAGAGCCATGTTAACCGCTGTCATCACTGCACTGCGGTCTTCTCACCCTGCGGTCGCTTCATAGCTACTGGCTCAGAGGACCATTGTCTCATCCTTTCCCTGTGTTTATTAAGAATAGTTACTCCTTGCTTAAGTGGAGTGTTTTATGGTGTCATGATGAGCACGAGTCTTTGCTCAAGTCAGTGGAATAATATGTGCGTGTTGATAGCTGTTATTAATCGCCGGCACTGGGTAAAGCAGGACGGTTTTGAGAAGATCTCCACAGCACCGCCTGCTTTCCAATGTTTCCTGGAAGCCAAATGGAGAGAACAGTAGTAGCTGTCTTGAGACTTCGATAAGCCAGATGAATTTGTTGATGCATTTTATATTTCAGAAGATAATCACAGAAAAAAGAACTTCATCGCCACCCGATTACTACATTAATCCCAAGCCTTATTATTTTAAGACATAAGTAACGAATACAAGTATGATCAACAAGAAGTGATTGATTTTGACCTCATAGGAATGAGGACATGGAAAACATGGCAAATTGTGCTTTTAACCACATTGTAAATTGTGCTTTTAACTGTGTTGCCATTACCTATCAGAAGTAATTTAAGAGGATAGTCGTTCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAATTGTCATGATTTACCCAAACTTATGTAACTGTGACTTTCTTCAATGGAATTTTTCTTCTGTGTCCCATTCAACACTGGACCGTATTGACTTTCATTGTATTAACAAAATATAGAAATGAGACATTTTTCAAAATATTTCTTTTGCATCCCACAAAAGAAATAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_05873142_05884821.mRNA True 1192 mRNA 0.42 6 5872644 5884821

Neighbor

gene id symbol gene type direction distance location
CI01000012_05847700_05849782 NA coding downstream 22488 5847486 ~ 5850156 (-)
CI01000012_05810254_05833540 THBS2A, THBS2 coding downstream 38894 5810050 ~ 5833750 (-)
CI01000012_05761654_05801725 PSME4, PSME4A coding downstream 70919 5761341 ~ 5801725 (-)
CI01000012_05757115_05758767 GPR75 coding downstream 113667 5756999 ~ 5758977 (-)
CI01000012_05738968_05745791 AGPAT4 coding downstream 126853 5738843 ~ 5745791 (-)
CI01000012_05889930_05893764 NA coding upstream 5109 5889930 ~ 5893764 (-)
CI01000012_05897865_05906600 NA coding upstream 12913 5897734 ~ 5906600 (-)
CI01000012_05932523_05940218 MKKS coding upstream 47668 5932489 ~ 5940218 (-)
CI01000012_05988471_06021245 JAG1B, JAG1 coding upstream 101995 5986816 ~ 6021529 (-)
CI01000012_06147833_06153076 NA coding upstream 262874 6147695 ~ 6154203 (-)
G72403 NA non-coding downstream 124933 5747492 ~ 5747711 (-)
G72402 NA non-coding downstream 125370 5747045 ~ 5747274 (-)
G72368 NA non-coding downstream 153624 5711572 ~ 5719020 (-)
G72367 NA non-coding downstream 162471 5695997 ~ 5710173 (-)
CI01000012_05672517_05674075 NA non-coding downstream 198009 5672229 ~ 5675834 (-)
G72408 NA non-coding upstream 27487 5912308 ~ 5914599 (-)
G72406 NA non-coding upstream 30815 5915636 ~ 5917433 (-)
G72623 NA non-coding upstream 255559 6140380 ~ 6140635 (-)
G72626 NA non-coding upstream 259254 6144075 ~ 6144275 (-)
G72636 NA non-coding upstream 272062 6156883 ~ 6157118 (-)
G72294 NA other downstream 406787 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 455864 5413369 ~ 5416780 (-)
G72204 NA other downstream 570438 5293773 ~ 5302206 (-)
G72068 NA other downstream 1092512 4776220 ~ 4780132 (-)
G71898 NA other downstream 1337972 4533530 ~ 4534672 (-)
G72629 NA other upstream 262190 6147011 ~ 6147494 (-)
CI01000012_07356934_07358497 NA other upstream 1470431 7356863 ~ 7358612 (-)
G74648 NA other upstream 2379508 8264329 ~ 8265654 (-)
G74701 NA other upstream 2482198 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 3183085 9067906 ~ 9070765 (-)

Expression


Co-expression Network