G150196


Basic Information

Item Value
gene id G150196
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 7981094 ~ 7981400 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU203412
cacagactgtatatagctggacagagcatcgtctcttaaaagtgaagccaccacaggtcgggcgccccctgctgtttggctgcagaaagctgtgtaactccacccatccccataggtttcaatggcaaaacagacaactttcaatcacgtttttttctaatatactgtaattctacctccattatttaaatgcaacagctagtgtaacctctgcttatattgtcaaatttttatatccccacagaattcattttttaaaacgttattcagctctattcaaaaaaggtgtggttatggtaaaagggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203412 True 307 lncRNA 0.40 1 7981094 7981400

Neighbor

gene id symbol gene type direction distance location
LOC103046888 LOC103046888,LOC108424009 coding upstream 143669 7821981 ~ 7837425 (+)
neu4 neu4 coding upstream 353554 7620597 ~ 7627540 (+)
srprb srprb coding upstream 369483 7606489 ~ 7611611 (+)
LOC103022780 myl10,LOC103022780,LOC108424014,LOC108413922,LOC107734439,LOC107577538,LOC107728843 coding upstream 440958 7517004 ~ 7540136 (+)
LOC111194504 NA coding upstream 1034126 6944489 ~ 6946968 (+)
ap1m1 ap1m1,LOC107696211 coding downstream 10094 7991494 ~ 8017086 (+)
LOC103039989 LOC108427187,LOC108429492 coding downstream 194709 8176109 ~ 8179619 (+)
LOC111194453 NA coding downstream 316844 8298244 ~ 8299583 (+)
LOC111194511 LOC108427182,LOC108280696,LOC107750922,LOC105906996 coding downstream 347898 8329298 ~ 8357694 (+)
LOC103029326 LOC103029326,LOC108427183,LOC107750947,LOC107696854,LOC107552712,LOC108280697,LOC107723974,LOC107596250,LOC107687917 coding downstream 387969 8369369 ~ 8373186 (+)
G150203 NA non-coding upstream 12030 7968777 ~ 7969064 (+)
G150132 NA non-coding upstream 103144 7876195 ~ 7877950 (+)
LOC111194509 NA non-coding upstream 107961 7866110 ~ 7873133 (+)
G150104 NA non-coding upstream 173923 7806866 ~ 7807171 (+)
G150069 NA non-coding upstream 241006 7679668 ~ 7740088 (+)
G150235 NA non-coding downstream 147066 8128466 ~ 8128760 (+)
G150239 NA non-coding downstream 174236 8155636 ~ 8155845 (+)
G150245 NA non-coding downstream 206867 8188267 ~ 8190741 (+)
G150254 NA non-coding downstream 226068 8207468 ~ 8261000 (+)
G150248 NA non-coding downstream 276512 8257912 ~ 8309434 (+)
G150131 NA other upstream 101793 7874640 ~ 7879301 (+)
G150099 NA other upstream 175840 7769684 ~ 7805254 (+)
LOC111194506 NA other upstream 729728 7249165 ~ 7251366 (+)
G149984 LOC108444119,LOC108444125,LOC108412201,LOC108416439 other upstream 1033158 6935341 ~ 6947936 (+)
c17h3orf80 NA other upstream 1394725 6583046 ~ 6586369 (+)
G150321 timm44,LOC108427097,LOC105903914 other downstream 667430 8648830 ~ 8656708 (+)
G150579 NA other downstream 1574259 9555659 ~ 9567097 (+)
G150674 tpgs1 other downstream 1869818 9851218 ~ 9852854 (+)
LOC103031168 NA other downstream 2160724 10142124 ~ 10152717 (+)
LOC103021810 kcnj10,LOC107684569,LOC107730827,LOC107683767,LOC107750225,LOC108280182,LOC107576513 other downstream 2210120 10191520 ~ 10279830 (+)

Expression


Co-expression Network