G150203


Basic Information

Item Value
gene id G150203
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 7968777 ~ 7969064 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU203419
cagcccttttacaataaccacacctttttttaatagagctgaataacgttttaaaaaacgaattctgtggggatataaaaatttgacaatataagcagaggttacactagctgttgcatttaaataatggaggtagaattacagtatattagaaaaaaacgtgattgaaagttgtctgttttgccattgaaacctatggggatgggtggagttacacagctttctgaaaccgaacagcagggggcgcccgacctgtggtggcttcacttttgagagacgatgctctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203419 True 288 lncRNA 0.39 1 7968777 7969064

Neighbor

gene id symbol gene type direction distance location
LOC103046888 LOC103046888,LOC108424009 coding upstream 131352 7821981 ~ 7837425 (+)
neu4 neu4 coding upstream 341237 7620597 ~ 7627540 (+)
srprb srprb coding upstream 357166 7606489 ~ 7611611 (+)
LOC103022780 myl10,LOC103022780,LOC108424014,LOC108413922,LOC107734439,LOC107577538,LOC107728843 coding upstream 428641 7517004 ~ 7540136 (+)
LOC111194504 NA coding upstream 1021809 6944489 ~ 6946968 (+)
ap1m1 ap1m1,LOC107696211 coding downstream 22430 7991494 ~ 8017086 (+)
LOC103039989 LOC108427187,LOC108429492 coding downstream 207045 8176109 ~ 8179619 (+)
LOC111194453 NA coding downstream 329180 8298244 ~ 8299583 (+)
LOC111194511 LOC108427182,LOC108280696,LOC107750922,LOC105906996 coding downstream 360234 8329298 ~ 8357694 (+)
LOC103029326 LOC103029326,LOC108427183,LOC107750947,LOC107696854,LOC107552712,LOC108280697,LOC107723974,LOC107596250,LOC107687917 coding downstream 400305 8369369 ~ 8373186 (+)
G150132 NA non-coding upstream 90827 7876195 ~ 7877950 (+)
LOC111194509 NA non-coding upstream 95644 7866110 ~ 7873133 (+)
G150104 NA non-coding upstream 161606 7806866 ~ 7807171 (+)
G150069 NA non-coding upstream 228689 7679668 ~ 7740088 (+)
G150065 LOC108424050 non-coding upstream 309099 7654428 ~ 7659678 (+)
G150196 NA non-coding downstream 12030 7981094 ~ 7981400 (+)
G150235 NA non-coding downstream 159402 8128466 ~ 8128760 (+)
G150239 NA non-coding downstream 186572 8155636 ~ 8155845 (+)
G150245 NA non-coding downstream 219203 8188267 ~ 8190741 (+)
G150254 NA non-coding downstream 238404 8207468 ~ 8261000 (+)
G150131 NA other upstream 89476 7874640 ~ 7879301 (+)
G150099 NA other upstream 163523 7769684 ~ 7805254 (+)
LOC111194506 NA other upstream 717411 7249165 ~ 7251366 (+)
G149984 LOC108444119,LOC108444125,LOC108412201,LOC108416439 other upstream 1020841 6935341 ~ 6947936 (+)
c17h3orf80 NA other upstream 1382408 6583046 ~ 6586369 (+)
G150321 timm44,LOC108427097,LOC105903914 other downstream 679766 8648830 ~ 8656708 (+)
G150579 NA other downstream 1586595 9555659 ~ 9567097 (+)
G150674 tpgs1 other downstream 1882154 9851218 ~ 9852854 (+)
LOC103031168 NA other downstream 2173060 10142124 ~ 10152717 (+)
LOC103021810 kcnj10,LOC107684569,LOC107730827,LOC107683767,LOC107750225,LOC108280182,LOC107576513 other downstream 2222456 10191520 ~ 10279830 (+)

Expression


Co-expression Network