G150572


Basic Information

Item Value
gene id G150572
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 9481817 ~ 9490264 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU203902
agaaaaaaataaacctttattCTTCTTGCTGTAAGCAGCAAACAGTTTGTGTACATAGAAAGAGGTACAAACAACATTCAGGACAATATTTGtttagatatatataaatataaaaaataatactttgaaacactaaaaaataaaaaagagtattCATCATCAGCAAATGGTCTTTAAAGTCTTCTTTCACAGAGCATCACCACTTATCATCGATACAGTCGTCATCATCGGTCGAGCACTGTGTTAGATCCACAACGTCGTCTAGCAGTACAGGCTCACTTTtgagGCTGAGTGAAGAGTGGTCTGGGGTTTTGTTGCTCTCGCACTCTTCTCTCACTGGTCTCCAGGAGCCATTAGACAGGTACTCAATCACCTCCACATCTTCTTCTGTGCTCTGGAGGATGTTACTCAGCAAATATCGATCTGGAGTGTTTCAAAGAGAGCAGGCTTATGGCAGACAGGACAGGTCCACCTAGGCTTTCTCTCGTTCATCTGCAGGTAGAAGGCTGCGTCAAAGCACTGCAGGTGGGCACACGGCTGCGCTCGACAGGGGGCTGACATTCGGGTTTTCGCCAGAGGACAGATCAGGGACACTTGCAGCCCTGTGGTGGCGATCTCATTCTCAGCATCGCAACACAGCTTCTCACAAATTCTCTGTCTGCAGTGCTCCTCACTTTCCACAGCTTTGTTCTGAAGATGCTCAAAAAGATCTGTTGAGGTGAAAGCCCTCACCAGATATACAGCTACAGAATAGTGCTTGCCATAATTACCCCACATTACAGTAACACGGTTCACAGCGGTCTGTCTTAATAATGGGGTGAGATTGATTGGGCAGCAGGGGCGAGAAGGCTCCAAGCCTTCCTTACTGGATGCATAGCGGATCTGTAGGTCGCATTCTATGCCGTTGACCAACACAGAAATCTTGGGTGGATATTGATCGTCTTCAACGCCAACACTCTCTGTGTAGCACATTCTGAGCACCACTTGAAAGGACTTCAGCTTGGAATTGGACCCTTGAGAGCTCCTGATCTGAGTCCACTGGTTTGGAGTCAGGCACACTGTGATGGAATCTGTCTGCAGTTTAAGAGCAGAAACAGGCACTAATGGCACTAGAGGAACAATGGTCTCTAGTGTCTGATAGAAGGGAAGCTTGATCATCTGCGGCTCAGAGACGAGGCTGGGGGTCACTACGTCTGGTTTGCTGAGGCACTCAGCTGTGGGCATGGCTATAACCTCAGGAGAAGGCGGGATGGAGATGACCTGCGAGCGCCTGTTTTTGCCGGTAGTGGACTGGCGGAGTTTGTAGAGCTCCTGGATGGTGGAGAGCAGATCTGGTCTTTTCTCTTTCTGGAGGAGCCCAGTTACTCTTTGGACCAGCTCTTTCTTCAGGCCCTTCTTGCTCTTGCCAATAGAGGAGAGGAACTCGCGCAGCTCAGCCACTCGCAGGCTCTTCACCATATTCGTGGCTTCCAGCAGTTCAGCAGACATTCCCATGGGTTAATCTCAGCGGGTCTAAACTactgaaatatataaatcagGCAGGTAACGCTGGATTAGCTAATCCGCTGCTGACAGCCTTCAAAACTCCCGGTTAAACCGCAGCCGAAATCGCACGCCGAAAAGAGGGCGTGACCCGGGTCACGTGATCAGA

Function

GO: NA

KEGG:

id description
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU203902 True 1651 lncRNA 0.48 11 9481817 9490264

Neighbor

gene id symbol gene type direction distance location
LOC103031140 LOC108427160,LOC107724981,LOC108280289,LOC106923029,LOC107096951 coding upstream 121860 9278465 ~ 9359957 (+)
eef2 LOC101482186,LOC102796634,LOC107096963,LOC101162630,LOC100708490 coding upstream 227700 9234681 ~ 9254117 (+)
LOC103025531 LOC108427106 coding upstream 603013 8865571 ~ 8878804 (+)
polr2e polr2e,polr2eb,LOC107669821 coding upstream 698619 8777660 ~ 8783198 (+)
LOC111194513 LOC108427173,LOC105903927,LOC108280567,LOC105900968,LOC107660390,LOC100697758,LOC100692846 coding upstream 800957 8667922 ~ 8680860 (+)
LOC103028184 LOC108427103 coding downstream 35069 9525333 ~ 9584009 (+)
LOC111194519 NA coding downstream 319062 9809326 ~ 9819170 (+)
plekhj1 plekhj1,LOC107671816,LOC107696566,LOC107750216 coding downstream 339839 9830103 ~ 9837255 (+)
LOC103025670 NA coding downstream 383702 9873966 ~ 9882127 (+)
LOC111194523 NA coding downstream 409064 9899328 ~ 9926814 (+)
G150571 LOC108427153,LOC100697571,LOC103366683,LOC102792644,LOC102194177 non-coding upstream 3354 9474337 ~ 9478463 (+)
G150568 NA non-coding upstream 29690 9451921 ~ 9452127 (+)
G150565 LOC103028498,LOC108427154 non-coding upstream 47287 9415552 ~ 9434530 (+)
G150562 NA non-coding upstream 75351 9402053 ~ 9406466 (+)
G150558 NA non-coding upstream 82395 9395403 ~ 9399422 (+)
LOC111194518 NA non-coding downstream 19590 9509854 ~ 9512555 (+)
G150580 NA non-coding downstream 109196 9599460 ~ 9600049 (+)
G150586 NA non-coding downstream 168796 9659060 ~ 9667287 (+)
G150663 NA non-coding downstream 274807 9765071 ~ 9765448 (+)
G150669 NA non-coding downstream 297204 9787468 ~ 9790595 (+)
G150321 timm44,LOC108427097,LOC105903914 other upstream 825109 8648830 ~ 8656708 (+)
G150131 NA other upstream 1602516 7874640 ~ 7879301 (+)
G150099 NA other upstream 1676563 7769684 ~ 7805254 (+)
LOC111194506 NA other upstream 2230451 7249165 ~ 7251366 (+)
G149984 LOC108444119,LOC108444125,LOC108412201,LOC108416439 other upstream 2533881 6935341 ~ 6947936 (+)
G150579 NA other downstream 65395 9555659 ~ 9567097 (+)
G150674 tpgs1 other downstream 360954 9851218 ~ 9852854 (+)
LOC103031168 NA other downstream 651860 10142124 ~ 10152717 (+)
LOC103021810 kcnj10,LOC107684569,LOC107730827,LOC107683767,LOC107750225,LOC108280182,LOC107576513 other downstream 701256 10191520 ~ 10279830 (+)
LOC103040721 LOC108427133,LOC108280800 other downstream 830005 10320269 ~ 10363375 (+)

Expression


Co-expression Network