G150681


Basic Information

Item Value
gene id G150681
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 9869699 ~ 9871616 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU204045
CGTGTAAGAGTCTCCATCTCTGCACACTGATGTGGTTTGATAAGAGTACTGAGACTTGATGTACTGCTCAGTGTACCGCACATTTGGGCTGTTGATGCGAATCTTCTCAggcatgattaaaaaaACCCTTTCCGCTGATGTAGAGTCTGGTTCTCTTTACAGAGGATTAAACAGCAGTTTTAGCTGTTTCTGCAGtaaaagaagaggagaaaagTATTTTCCTGGAGCTGAAAGTCGGTCTGATCTCTGGATGCAGCGCCGCAGTGCCTCTCAGATGCTCCTCTTTTAAGCCGCCGGTTAATGGAAGTTTCCACCAGTCTCAAAGCCCCGCCCACCAGCCAATGAGAAACGAGCTGTTCAGAATTCTAGAGTCttcaagaaaaaaatgaaaaagacttGACCAGATAAAGGAAATGTACAGAAGCTTCTGATCTAAACTTCACCAACagtactatctatctatctatctatctatctacatataTTAAAGATATTTCAGTTTCGgtttgtatgtgtttgagtGGCAGAAAGACAATGCCAGCAAGATGCCACAGCACTCATTAAGTAGGTTGATGGGATAAGAAGTTCAGTCAACACATTAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204045 True 604 lncRNA 0.42 2 9869699 9871616

Neighbor

gene id symbol gene type direction distance location
plekhj1 plekhj1,LOC107671816,LOC107696566,LOC107750216 coding upstream 32444 9830103 ~ 9837255 (+)
LOC111194519 NA coding upstream 50529 9809326 ~ 9819170 (+)
LOC103028184 LOC108427103 coding upstream 285690 9525333 ~ 9584009 (+)
LOC103031140 LOC108427160,LOC107724981,LOC108280289,LOC106923029,LOC107096951 coding upstream 509742 9278465 ~ 9359957 (+)
eef2 LOC101482186,LOC102796634,LOC107096963,LOC101162630,LOC100708490 coding upstream 615582 9234681 ~ 9254117 (+)
LOC103025670 NA coding downstream 2350 9873966 ~ 9882127 (+)
LOC111194523 NA coding downstream 27712 9899328 ~ 9926814 (+)
LOC111194611 NA coding downstream 44838 9916454 ~ 9917473 (+)
LOC103032638 LOC101168737 coding downstream 171110 10042726 ~ 10049750 (+)
LOC111194527 NA coding downstream 179704 10051320 ~ 10054422 (+)
G150673 LOC107552671 non-coding upstream 12544 9855134 ~ 9857155 (+)
G150671 NA non-coding upstream 48908 9820586 ~ 9820791 (+)
G150669 NA non-coding upstream 79104 9787468 ~ 9790595 (+)
G150663 NA non-coding upstream 104251 9765071 ~ 9765448 (+)
G150586 NA non-coding upstream 202412 9659060 ~ 9667287 (+)
G150704 NA non-coding downstream 83850 9955466 ~ 10016966 (+)
G150705 NA non-coding downstream 118858 9990474 ~ 9998264 (+)
G150698 NA non-coding downstream 138634 10010250 ~ 10032076 (+)
G150709 LOC108427146 non-coding downstream 143595 10015211 ~ 10024979 (+)
G150725 NA non-coding downstream 222975 10094591 ~ 10096762 (+)
G150674 tpgs1 other upstream 16845 9851218 ~ 9852854 (+)
G150579 NA other upstream 302602 9555659 ~ 9567097 (+)
G150321 timm44,LOC108427097,LOC105903914 other upstream 1212991 8648830 ~ 8656708 (+)
G150131 NA other upstream 1990398 7874640 ~ 7879301 (+)
G150099 NA other upstream 2064445 7769684 ~ 7805254 (+)
LOC103031168 NA other downstream 270508 10142124 ~ 10152717 (+)
LOC103021810 kcnj10,LOC107684569,LOC107730827,LOC107683767,LOC107750225,LOC108280182,LOC107576513 other downstream 319904 10191520 ~ 10279830 (+)
LOC103040721 LOC108427133,LOC108280800 other downstream 448653 10320269 ~ 10363375 (+)
LOC111194616 NA other downstream 538177 10409793 ~ 10442243 (+)
mau2 mau2,LOC106573592 other downstream 751043 10622659 ~ 10635541 (+)

Expression


Co-expression Network