G150705


Basic Information

Item Value
gene id G150705
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 9990474 ~ 9998264 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU204070
TTACAAACTAAATcaaactgttttatttcagaaataaatGTCAGTAATTCAGTCTTCCATGAATGGGGCCCTTTTAACAATGGCAATACAACACGTCCCATGTGGTAACTACAGCTTAACACTAATACAATtatataaacactgtatattCAAAAATATCCAGACTCTCTTCTAATCAGTAATTCATCTAGTTTACACtgaccagccataacattagatCCACATAGAGGTAAAGTGAAAAACAAGGGGACCTACACTTCCTGACCGAAAAAAGTCTCcatctggatttaagtaagtaaatgatgtggggttggttgatgctgcagttggtctgcaggtttaggttcagcaacagtatgtgctgaaaaaatgaggtcagctgactctacctgaatatactgagtatagaccagattattccatcaatggatcaattttttctttcctgatgatcacggccatattccaagatgacaatgtcaggattcatggagctggaattgtgaaagagttcagggttcagggagcatgagatcatcattttcacacatggattgagagagagatttcaccacagagtccagatcttaacctcattgagaatctttgggatgtgctggatggagaagagctgctttatgcagcggtcagactctacaaccatcaatgctgctgcaagatcttggtgaaaagttaatgcaacactggattgaaataaatcttgtgacattgcagaagctcatcgaaacaatgccacagtgaatgtattgtgcaatcaaagctaaaggcgttTTTTGGGCAAGCGAACATTAGTCAAGGACCAAACTGTCCAATAAGCACAGGGCAGTATTGTGGAGTCCATGCCACAAATGGCTCAGACATATtgtggtaaaacatggtggatATAGGTATCACTATGCaggtggtgctaatgttatggctgattagcGTAAGGTTTACACATTCCTCAAACAGGTGGGCAAGTGTGCGCAAACAGCTTGTATAATCTCCATAGAAAAGCACAACTCAATGAGCTCTGTACATCCACCCAAGATCACCATGATCTGTGCACAATGTCCAGGGCCACGTTTTTTAGCTACAGTGATGCAAaactcatgtctatgttaccttctggctttctctgtttatttaagattttacaGTTAGATCTGCTCCGTAAATACCAGGTAAATCTCTTCACCTTTTTCCGATGCTATTGACTGTCCACTTGTCCGACCAGATACCTTCAACCCAAGGTCACCATGCTGTAAAACAGTCCTCTGGAGGGCTGGAGTTCAGTCCAGTCTCTTTGAAATGAGTGGGAGTTGGTGCTTGTGATCCAGAAATTGATCGTTAAACATAAGTACCTGACATCACTAACGCTCACGTGGCTGtcagcaatcaaatcctcacagaaaaTGCAATTCCACTGCAATTCCTTCTCAAAAGAGTAGAGGCTTGTTACTGCAGCAGTAGTGGAGAAAATTTAAGTTCATATTGTCACTTTTAAATCAGTTCCA
>TU204072
TTACAAACTAAATcaaactgttttatttcagaaatGTCAGTAATTCAGTCTTCCATGAATGGGGCCCTTTTAACAATGGCAATACAACACGTCCCATGTGGTAACTACAGCTTAACACTAATACAATtatataaacactgtatattCAAAAATATCCAGACTCTCTTCTAATCAGTAATTCATCTAGTTTACACTGACCAGCCATAACAATAGATCCACATAGAGGTAAAGTGAAAAACAAGGGGACCTACACTTCCTGACCGAAAAAAGTCTCcatctggatttaagtaagtaaatgatgtggggttggttgatgctgcagttggtctgcaggtttaggttcagcaacagtatgtgctgaaaaaatgaggtcagctgactctacctgaatatactgagtatagaccagattattccatcaatggatcaattttttctttcctgatgatcacggccatattccaagatgacaatgtcaggattcatggagctggaattgtgaaagagttcagggttcagggagcatgagatcatcattttcacacatggattgagagagagatttcaccacagagtccagatcttaacctcattgagaatctttgggatgtgctggatggagaagagctgctttatgcagcggtcagactctacaaccatcaatgctgctgcaagatcttggtgaaaagttaatgcaacactggattgaaataaatcttgtgacattgcagaagctcatcgaaacaatgccacagtgaatgtattgtgcaatcaaagctaaaggcgttTTTTGGGCAAGCGAACATTAGTCAAGGACCAAACTGTCCAATAAGCACAGGGCAGTATTGTGGAGTCCATGCCACAAATGGCTCAGACATATtgtggtaaaacatggtggatATAGGTATCACTATGCaggtggtgctaatgttatggctgattagcGTAAGGTTTACACATTCCTCAAACAGGTGGGCAAGTGTGCGCAAACAGCTTGTATAATCTCCATAGAAAAGCACAACTCAATGAGCTCTGTACATCCACCCAAGATCACCATGATCTGTGCACAATGTCCAGGGCCACGTTTTTTAGCTACAGTGATGCAAaactcatgtctatgttaccttctggctttctctgtttatttaagattttacaGTTAGATCTGCTCCGTAAATACCAGGTAAATCTCTTCACCTTTTTCCGATGCTATTGACTGTCCACTTGTCCGACCAGATACCTTCAACCCAAGGTCACCATGCTGTAAAACAGTCCTCTGGAGGGCTGGAGTTCAGTCCAGTCTCTTTGAAATGAGTGGGAGTTGGTGCTTGTGATCCAGAAATTGATCGTTAAACATAAGTACCTGACATCACTAACGCTCACGTGGCTGtcagcaatcaaatcctcacagaaaaTGCAATTCCACTGCAATTCCTTCTCAAAAGAGTAGAGGCTTGTTACTGCAGCAGTAGTGGAGAAAATTTAAGTTCATATTGTCACTTTTAAATCAGTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204070 True 1520 lncRNA 0.41 2 9990474 9998264
TU204072 False 1516 lncRNA 0.41 2 9990474 9998264

Neighbor

gene id symbol gene type direction distance location
LOC111194523 NA coding upstream 63660 9899328 ~ 9926814 (+)
LOC111194611 NA coding upstream 73001 9916454 ~ 9917473 (+)
LOC103025670 NA coding upstream 108347 9873966 ~ 9882127 (+)
plekhj1 plekhj1,LOC107671816,LOC107696566,LOC107750216 coding upstream 153219 9830103 ~ 9837255 (+)
LOC111194519 NA coding upstream 171304 9809326 ~ 9819170 (+)
LOC103032638 LOC101168737 coding downstream 44462 10042726 ~ 10049750 (+)
LOC111194527 NA coding downstream 53056 10051320 ~ 10054422 (+)
LOC103032326 NA coding downstream 135546 10133810 ~ 10140513 (+)
LOC103040403 dad1,LOC103040403,LOC107713681,LOC107558269 coding downstream 384616 10382880 ~ 10386158 (+)
LOC111194532 NA coding downstream 392215 10390479 ~ 10407671 (+)
G150681 NA non-coding upstream 118858 9869699 ~ 9871616 (+)
G150673 LOC107552671 non-coding upstream 133319 9855134 ~ 9857155 (+)
G150671 NA non-coding upstream 169683 9820586 ~ 9820791 (+)
G150669 NA non-coding upstream 199879 9787468 ~ 9790595 (+)
G150663 NA non-coding upstream 225026 9765071 ~ 9765448 (+)
G150698 NA non-coding downstream 11986 10010250 ~ 10032076 (+)
G150709 LOC108427146 non-coding downstream 16947 10015211 ~ 10024979 (+)
G150725 NA non-coding downstream 96327 10094591 ~ 10096762 (+)
G150733 NA non-coding downstream 121057 10119321 ~ 10119769 (+)
G150735 NA non-coding downstream 170062 10168326 ~ 10178477 (+)
G150674 tpgs1 other upstream 137620 9851218 ~ 9852854 (+)
G150579 NA other upstream 423377 9555659 ~ 9567097 (+)
G150321 timm44,LOC108427097,LOC105903914 other upstream 1333766 8648830 ~ 8656708 (+)
G150131 NA other upstream 2111173 7874640 ~ 7879301 (+)
G150099 NA other upstream 2185220 7769684 ~ 7805254 (+)
LOC103031168 NA other downstream 143860 10142124 ~ 10152717 (+)
LOC103021810 kcnj10,LOC107684569,LOC107730827,LOC107683767,LOC107750225,LOC108280182,LOC107576513 other downstream 193256 10191520 ~ 10279830 (+)
LOC103040721 LOC108427133,LOC108280800 other downstream 322005 10320269 ~ 10363375 (+)
LOC111194616 NA other downstream 411529 10409793 ~ 10442243 (+)
mau2 mau2,LOC106573592 other downstream 624395 10622659 ~ 10635541 (+)

Expression


Co-expression Network