G150733


Basic Information

Item Value
gene id G150733
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 10119321 ~ 10119769 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU204114
ggcgccgagtggtccagcggtctaaggcgctgccactatgagcaggaggtcgcaggttcgaaccccagctcatgcagctttgccattaagctgccggcgtcagagggagcaaaattggccctgctccctctgggtgggtagatggcgctctctccccacatcactcctagggtaatgtctgcagcacagggcgtctgtgagctgatgtaccggagccgagccgctgtgctttcctccaagcgcgctggctgctcgaaaagaagcggtggctgacttcacatgtatcggaggtagcatgtgttagtcttcgccctcctggtgtgttgtggcattactagtgatagggggagtcctaatgagtgggttgggtaattggccgtgtaaattggggataaaaatgggaaaaattagaaataaaattata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204114 True 424 lncRNA 0.54 2 10119321 10119769

Neighbor

gene id symbol gene type direction distance location
LOC111194527 NA coding upstream 64899 10051320 ~ 10054422 (+)
LOC103032638 LOC101168737 coding upstream 69571 10042726 ~ 10049750 (+)
LOC111194523 NA coding upstream 192507 9899328 ~ 9926814 (+)
LOC111194611 NA coding upstream 201848 9916454 ~ 9917473 (+)
LOC103025670 NA coding upstream 237194 9873966 ~ 9882127 (+)
LOC103032326 NA coding downstream 14041 10133810 ~ 10140513 (+)
LOC103040403 dad1,LOC103040403,LOC107713681,LOC107558269 coding downstream 263111 10382880 ~ 10386158 (+)
LOC111194532 NA coding downstream 270710 10390479 ~ 10407671 (+)
LOC111194617 NA coding downstream 320954 10440723 ~ 10452490 (+)
LOC103024215 NA coding downstream 323221 10442990 ~ 10443712 (+)
G150725 NA non-coding upstream 22559 10094591 ~ 10096762 (+)
G150698 NA non-coding upstream 87245 10010250 ~ 10032076 (+)
G150709 LOC108427146 non-coding upstream 94342 10015211 ~ 10024979 (+)
G150704 NA non-coding upstream 102355 9955466 ~ 10016966 (+)
G150705 NA non-coding upstream 121057 9990474 ~ 9998264 (+)
G150735 NA non-coding downstream 48557 10168326 ~ 10178477 (+)
G150752 NA non-coding downstream 160701 10280470 ~ 10281215 (+)
G150757 NA non-coding downstream 181604 10301373 ~ 10307405 (+)
G150883 NA non-coding downstream 392319 10512088 ~ 10518923 (+)
G150902 LOC108427200 non-coding downstream 600733 10720502 ~ 10724360 (+)
G150674 tpgs1 other upstream 266467 9851218 ~ 9852854 (+)
G150579 NA other upstream 552224 9555659 ~ 9567097 (+)
G150321 timm44,LOC108427097,LOC105903914 other upstream 1462613 8648830 ~ 8656708 (+)
G150131 NA other upstream 2240020 7874640 ~ 7879301 (+)
G150099 NA other upstream 2314067 7769684 ~ 7805254 (+)
LOC103031168 NA other downstream 22355 10142124 ~ 10152717 (+)
LOC103021810 kcnj10,LOC107684569,LOC107730827,LOC107683767,LOC107750225,LOC108280182,LOC107576513 other downstream 71751 10191520 ~ 10279830 (+)
LOC103040721 LOC108427133,LOC108280800 other downstream 200500 10320269 ~ 10363375 (+)
LOC111194616 NA other downstream 290024 10409793 ~ 10442243 (+)
mau2 mau2,LOC106573592 other downstream 502890 10622659 ~ 10635541 (+)

Expression


Co-expression Network