G150935


Basic Information

Item Value
gene id G150935
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 10740733 ~ 10741138 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU204536
ttcgcagacaatgtgctgtcatggttcagatcgtacctcactgggcgctcgttcaaggtgtcgtggcaaggacagctgtcctcagcccgctccttatccactggggttccccaaggttcggtactgggaccccttctcttctccatatacaccacctctcttggtcaggttgtccgctcacacggattttcctaccattgctttgctgatgacacccagctatacctgtcgttctcacctgaagatcactcaatctctgcacggatatcgcagtgtctctctgacatatcctcatggatgaaggagcatcaccttcaattaaatctctcaaagactgaacttctggttataccagcaaaaccatcttttcaacacaacttctctataagtatcgactctctctctc

Function

GO: NA

KEGG:

id description
ko00604 Glycosphingolipid biosynthesis - ganglio series

RNA

RNA id representative length rna type GC content exon number start site end site
TU204536 True 406 TUCP 0.49 1 10740733 10741138

Neighbor

gene id symbol gene type direction distance location
LOC103047654 LOC108427199 coding upstream 22915 10706239 ~ 10717818 (+)
ndufa13 ndufa13,nduad,LOC102786334,LOC106569554,LOC106600555 coding upstream 39216 10697700 ~ 10701517 (+)
LOC103022822 LOC108427196,LOC108280712 coding upstream 47350 10645390 ~ 10693383 (+)
sugp1 sugp1,LOC107729615,LOC107563402 coding upstream 119728 10608598 ~ 10621005 (+)
rab8a rab8a,LOC107687930,LOC107696202,LOC103479775 coding upstream 147561 10585759 ~ 10593172 (+)
LOC103031053 LOC108427202 coding downstream 146488 10887626 ~ 10935801 (+)
LOC103025147 vapa,LOC108280766,LOC108427204,LOC107750204,LOC107683769,LOC107684566 coding downstream 249967 10991105 ~ 11016626 (+)
LOC103037664 LOC103037664,LOC108427112 coding downstream 527314 11268452 ~ 11271625 (+)
LOC103036211 NA coding downstream 804798 11545936 ~ 11548240 (+)
LOC111194538 crygn,LOC108427116,LOC100699485,LOC107600194,LOC103353965 coding downstream 836701 11577839 ~ 11582219 (+)
G150902 LOC108427200 non-coding upstream 16373 10720502 ~ 10724360 (+)
G150883 NA non-coding upstream 221810 10512088 ~ 10518923 (+)
G150757 NA non-coding upstream 433328 10301373 ~ 10307405 (+)
G150752 NA non-coding upstream 459518 10280470 ~ 10281215 (+)
G150735 NA non-coding upstream 562256 10168326 ~ 10178477 (+)
G150938 NA non-coding downstream 52410 10793548 ~ 10804059 (+)
G150953 NA non-coding downstream 198845 10939983 ~ 10942003 (+)
G150976 NA non-coding downstream 275615 11016753 ~ 11017418 (+)
G151022 NA non-coding downstream 331761 11072899 ~ 11073193 (+)
G151028 NA non-coding downstream 367533 11108671 ~ 11108906 (+)
mau2 mau2,LOC106573592 other upstream 105192 10622659 ~ 10635541 (+)
LOC111194616 NA other upstream 298490 10409793 ~ 10442243 (+)
LOC103040721 LOC108427133,LOC108280800 other upstream 377358 10320269 ~ 10363375 (+)
LOC103021810 kcnj10,LOC107684569,LOC107730827,LOC107683767,LOC107750225,LOC108280182,LOC107576513 other upstream 460903 10191520 ~ 10279830 (+)
LOC103031168 NA other upstream 588016 10142124 ~ 10152717 (+)
LOC103037335 LOC108280688,LOC108427207 other downstream 537227 11278365 ~ 11531411 (+)
LOC111194536 NA other downstream 790431 11531569 ~ 11539837 (+)
LOC103037021 LOC103037021 other downstream 811401 11552539 ~ 11561544 (+)
LOC103035375 LOC108427208,LOC108280686,LOC100331938,LOC107713688,LOC107600193,LOC107558294,LOC107729982 other downstream 846771 11587909 ~ 11604041 (+)
LOC103033441 abhd8a,LOC108439870,LOC107696148,LOC107754588,LOC107687901,LOC107596234,LOC108280232,LOC103352801 other downstream 2360256 13101394 ~ 13131453 (+)

Expression


Co-expression Network