G151226


Basic Information

Item Value
gene id G151226
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 11999323 ~ 12092980 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU204921
CTGGATTTAAAtaagtaaatgatgtggggttggttgatgctgcagttggtctgcaggtttaggttcagcaacagtatgtgctgaaagaatgaggtcagctgactacctgaatatactgaatatagaccaggttattccatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204921 True 142 lncRNA 0.41 3 11999323 12092980

Neighbor

gene id symbol gene type direction distance location
LOC103033776 plpp2,LOC103033776,LOC108427214,LOC107558288,LOC107729984,LOC107713693,LOC107667850 coding upstream 191849 11762992 ~ 11807474 (+)
LOC103042008 NA coding upstream 240109 11727535 ~ 11759214 (+)
LOC103034099 NA coding upstream 277648 11714071 ~ 11721675 (+)
LOC103034421 shd,LOC107558290,LOC107729990,LOC107600191 coding upstream 293766 11678270 ~ 11705557 (+)
ccdc94 ccdc94 coding upstream 323027 11670564 ~ 11676296 (+)
creb3l3 NA coding downstream 36189 12129169 ~ 12175408 (+)
LOC103040483 LOC108427120 coding downstream 90849 12183829 ~ 12187233 (+)
LOC103039850 celf5,LOC108444550,LOC108280171,LOC107750904,LOC107667861,LOC107696073,LOC107729965 coding downstream 202503 12295483 ~ 12522294 (+)
LOC107197877 LOC108442433,LOC108280639,LOC106596660,LOC106569828,LOC107750908 coding downstream 755438 12848418 ~ 12875728 (+)
napg napg,LOC107750913,LOC107696142,LOC107687900,LOC107596233 coding downstream 920803 13013783 ~ 13024569 (+)
G151181 NA non-coding upstream 35800 11963109 ~ 11963523 (+)
G151151 NA non-coding upstream 189013 11810051 ~ 11810310 (+)
G151138 NA non-coding upstream 285756 11660733 ~ 11713567 (+)
G151052 NA non-coding upstream 750897 11248103 ~ 11248426 (+)
G151028 NA non-coding upstream 890417 11108671 ~ 11108906 (+)
G151251 NA non-coding downstream 95810 12188790 ~ 12191234 (+)
G151257 NA non-coding downstream 125578 12218558 ~ 12218877 (+)
G151264 NA non-coding downstream 155510 12248490 ~ 12249187 (+)
G151272 NA non-coding downstream 200102 12293082 ~ 12293521 (+)
G151302 NA non-coding downstream 451084 12544064 ~ 12607087 (+)
LOC103035375 LOC108427208,LOC108280686,LOC100331938,LOC107713688,LOC107600193,LOC107558294,LOC107729982 other upstream 395282 11587909 ~ 11604041 (+)
LOC103037021 LOC103037021 other upstream 437779 11552539 ~ 11561544 (+)
LOC111194536 NA other upstream 459486 11531569 ~ 11539837 (+)
LOC103037335 LOC108280688,LOC108427207 other upstream 467912 11278365 ~ 11531411 (+)
G150935 NA other upstream 1258185 10740733 ~ 10741138 (+)
LOC103033441 abhd8a,LOC108439870,LOC107696148,LOC107754588,LOC107687901,LOC107596234,LOC108280232,LOC103352801 other downstream 1008414 13101394 ~ 13131453 (+)
LOC103033117 LOC108439884,LOC100333521,LOC107696163,LOC107750940 other downstream 1010135 13103115 ~ 13109604 (+)
LOC107197015 NA other downstream 1137122 13230102 ~ 13236737 (+)
LOC103039742 LOC108439864,LOC108280459 other downstream 1204614 13297594 ~ 13335076 (+)
G151621 NA other downstream 1507629 13600609 ~ 13633602 (+)

Expression


Co-expression Network