CI01000012_06496870_06580459


Basic Information

Item Value
gene id CI01000012_06496870_06580459
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6496143 ~ 6580919 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_06496870_06580459.mRNA
ATCTCTCCTCTATCTCTCCTAAAGTCTAGGTGCCCCACTCTCTGAGCATAACGTCTGAAAATGATGCGGACGACCTCCTCTATCAGGACCCCTCACCTTTCCATTCACTCTCTGCCTGAGGGGATGAGAGAGAGAGTGAGAGAAAGACTCAGAAGTAATGATCTAAATAAATGCAGAAGAGTTCCCAGCAGGAAATGCTTCTGCCGTGTGTTTGCTATAGTGGTTCTCAACTAGAGGGATGCAACACAAAAATGGGTCACAGGTCTGTTGTGAAAAAACAATGCTAATTGCAATGAACAATATAGCCATTTATAGTTAGTATGGTAAAATAAAAAGGTTTAGGCCATCTGTCCAATCAAATCATATTATTTTGCTTCGAATTCATGTGTCGTTTGGTAATGCAAGCAAAATTAGGCAGATGCTTGCATAAATAGGTTGCATAACATTATTCTCAAGAGCCATGAGAAAAAGTATGTTTTTTACAAGATCGACCGTGTCATATTCTGCGTCTTTCTGGAGACAGATTATGAGATTTACAAGAGGAAGATGTCAGATTTCTTCTCCCCAGGCCAAGTCTCTCTCAGGAAGCCTCTTTTCAGTCTCCCTGAGCGCTAAACAAACATATGATGTCTTGCTGAAAGAGAGAATTCACCAGAGAATTTGTAATTATATCAGCCAGGTCCCTGTTCCCCAGATAATGACGACCATAAGAAAGAAGATGATGCCAGAATGGAGCAAGGAGCTAAATAGAAGGCGGCAGAGCTCTGAATCGCATTTGCACACTCATAAGCCGCTGTTTTGTTTTGTTTTGAGTTGGGAGTATCGATTTGGTACCAAAGTACCAGTGTTTTTGACATCCTTATTGCCAACTTTTGATTCACTTTTCCCTCTACCAGCATTGAGGACTGTAGCTATGAGCATTTTTAATAGTAGTCTCGCCAGGCAGAGGAGGCAAAGCGAATGTTCTGCTTGGACCGAACCCAAAGAGCCAAAGATACTTGCAATTGTGTTCCCTGGAGAAGTGAGGTTTTTAAGACCAGGTGAGACGGAGCTGGAGATGCAGAAACAGAGGCTAAATCTGAATTTACCTGAGTACCGAGCACCTGCGACGCATGAATCATTCCCCTATGAGTGCAGACCAGCATCTGACAGCCGTGATGACGAAACCATGGTCCAGGAGGACAAAACGTCTGCAAAGGAAGACCATAAAGTGGAGGTGAGTCCAACAGCAAAGAAGAAACCTGAACCTGAGAGAGAAAAAGAGAAGGAGAAGAAAGAAGACAAGGGAGATGATCCACAAGTTGCAGCAGCCCTCCAAAGTCCTTACTGGCTTCCTGTAAAGGAACTGAGAGCTTGGAAAGCTCTATTCTTGTCATCAAAGGGGGCGAGAAAGAGGATAGCCCAGGAAAGAAGATGCCAACAGGCCAGACTGATGAAGCGGGAAAACAGATGGAAGGCACCTATGAATAAGTCTGGCTTTGCTAATGGAGGGCGTTTTTTCGGCCGTGGTGGATTGCGGCTCCTGCGGTGGGAGTCGATATCGCCTCTTCGCCTGTATGCAGAGTTTGTCTCCTCATCTCTCACTGTCTGCCTGATGAAGGAGGGGGTTTTCACTCTGTCGCACCAACTGAGCCCTCCAGACGGAGTGTGTGAAGAATATGGAGGCAGGATAAATCACGGCGAAAGTGAAGAGTTGCTGAGGCACAGGGTGCAGAGCTTATATTTGATAATGGCAGTTTTGTTTTGCTCATGCCTATTCATTTTGTCCCTCTCACACATCTCTCTCCCTCTCAGACCGTGCAAAGACTCAACAAAGAGTGCAGACATCGGGGCGGACACCAGTCTAGAGCCTGCGGATCCCATGGAGGTTCAGGCAAGGTCTAAAGGTGCTCATGCATCCTATTTTCTGCTGCTACAACTTTTGTTGAATATAATCTCATGCCGAGGATTTCGCAGTGGGTCAGATGCTGTCACAACAGCCAAGGAGAGCAACACCAGCAGCACTAAAGGACAAGAGCTCACAAGAGCCCGACTCAACTCCACCAGACAGCAGACCAAATTCCGAAGCAGACTGACCTCCACTGCTGGCACAGACAAAAAACTCCAGCAGCCAGAGAGACACATGGAGCCCGTTCACAAGGTTTTCATTGTGGTTTGCGCTGTGCTGCATGCGATGAGGAACAGAGAAGGCCATCCTGATACAGTAGGTTTCAAAAATGCAGCAAGAAAAAGAAGAACAGAAAGAAAGAAATGCAGCTCATATGGCTCTCTTTGGCAGTTAAAAGCTTGCTGTCATTATGAACAAACCCACGTCTGGTTAAGTCAGTGGCTCTGGCATAAAGCTGACGAGAATCAAGATCACAATTATGATTTTCTTTCCATTTTATTCCTGTCACCCAGAACAGCAGTGCTTCACCCCTCTAATAGTCTCAAATTACAGGCTGGATCGCTCAGTCATTACGCGAGGACACAATTACTTTGTGCAAGGGCGCTGTCACTCCGCTATAAACTTCATGCTCCATATGTCTATTCCTCCTCTACCCCAAAGAAGAAAATAAGAAAGGGGAGAGCGACAGAAAGAATGTGCCAGAGCGAGAAAGTGAAAGGAGAAATCAATTGGCACCATTTTAAAGAGTTTCAAACACATCCTATCTCCAGCAACCAGATGTCTGCAGGGCACAATTTCATTTATAAGAGAAAGACAGAAAGCGATAGCGATAGTAGAACTGTAGTGTGCTACTGCCCCCATCTGACCATATTAGTGCGTATCAGTTTATCACTGTATGAGGACACATGCAGAGATTCAAAGTCCTGAACATTCAGGTATTTAAACGCGTTTAAAGACATGTAAGAAATTATATTATACACTATGACCACACCAAACATTTAATACACACCATTTGCAACTATACACTTCATTTAGGAGAAAATATACTGTCAATTTGAGGAAGGTGAGCAAGCAGGAGTGACTGCAGGCCTCTCCGGGGAGGCTGAGAAAGATGGCTCCACTAAGCAGTGAGGGAAAAATCAGATCACCTTGAATTAGCATAAACTATCTTCAGATGGAGATACACGGTCTAAATGCAGGCAATCCCAATTGGAATAACTTCTAGTGTTGGATTACTATTGGGTTCAGCCGGGTCATTTAGCACTTAGAGAGAGTCCCCGGAGGCACCGAGAGCATTCAGGTTGGACAAATTGCAGCACCGCTGTGGCAGGTCTCCACCAGAGGGAGGGTGCCTGGGGAACTCACTGGCTCAATTTACACAGTTCAGAGACGAAGCTTGGCACCTGGAGAGAGAGGTGGAGAGAACTCTTGGTACCTGAAGTGACAATTACACAGCTATGCAAATATTGTGGACCATCACCGATTCAGATTAGGTGACCCTGACAGGGTGAGAGAGGTTGAGTCTGGCCCTGAGGGATGAGAAATGCTATATGGCTCTTTTAAACCAGGTTCAGCTGATGCTTTTAAAGAGTGGAAAAGCACAGATGGCACTCATCATTGGCAAAATGTTTATTCAGATTTAAGAGTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_06496870_06580459.mRNA True 3542 mRNA 0.45 23 6496143 6580919

Neighbor

gene id symbol gene type direction distance location
CI01000012_06406744_06433128 TASP1 coding downstream 63015 6406744 ~ 6433128 (-)
CI01000012_06147833_06153076 NA coding downstream 341940 6147695 ~ 6154203 (-)
CI01000012_05988471_06021245 JAG1B, JAG1 coding downstream 474614 5986816 ~ 6021529 (-)
CI01000012_05932523_05940218 MKKS coding downstream 555925 5932489 ~ 5940218 (-)
CI01000012_05897865_05906600 NA coding downstream 589543 5897734 ~ 5906600 (-)
CI01000012_06597401_06599198 NA coding upstream 16369 6597288 ~ 6600700 (-)
CI01000012_06694889_06695185 NA coding upstream 113868 6694787 ~ 6695223 (-)
CI01000012_06713565_06749032 NA coding upstream 132537 6713456 ~ 6749070 (-)
CI01000012_06872835_06911259 NA coding upstream 291796 6872715 ~ 6911968 (-)
CI01000012_06979304_06984075 NA coding upstream 398377 6979296 ~ 6984944 (-)
G74066 NA non-coding downstream 168015 6327892 ~ 6328128 (-)
G74063 NA non-coding downstream 171573 6324358 ~ 6324570 (-)
G72707 NA non-coding downstream 192080 6303741 ~ 6304063 (-)
G72699 NA non-coding downstream 198636 6297200 ~ 6297507 (-)
G72687 NA non-coding downstream 209358 6286361 ~ 6286785 (-)
G74142 NA non-coding upstream 188914 6769833 ~ 6858642 (-)
G74252 NA non-coding upstream 433946 7014865 ~ 7020574 (-)
CI01000012_07032479_07034631 NA non-coding upstream 439811 7020730 ~ 7035201 (-)
G74117 NA non-coding upstream 457577 7038496 ~ 7053630 (-)
G72629 NA other downstream 348649 6147011 ~ 6147494 (-)
G72294 NA other downstream 1030286 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 1079363 5413369 ~ 5416780 (-)
G72204 NA other downstream 1193937 5293773 ~ 5302206 (-)
G72068 NA other downstream 1716011 4776220 ~ 4780132 (-)
CI01000012_07356934_07358497 NA other upstream 774333 7356863 ~ 7358612 (-)
G74648 NA other upstream 1683410 8264329 ~ 8265654 (-)
G74701 NA other upstream 1786100 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 2486987 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 2490452 9071371 ~ 9073457 (-)

Expression


Co-expression Network