G151264


Basic Information

Item Value
gene id G151264
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 12248490 ~ 12249187 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU204980
aaaaagacttaaggctgtctaccaaaggttttaaacctgccacaggcagaaattatacatttttggtttatatttgtgcatggcatttcgcagtttccagaaacagtagcattattcataagttcaggtgtttagctaagctagctgccttaagttattttagctagcgccgtcggcgctgcggtgttacaccgttttctgtcaccgtcggaattttgtgaccagtgctcacggttatgagcgttcattggcaaaacggaagctttctatacctacaccttaccctcagccctaaactgaaccgttttggccagtcggggtaaacattagaaacgaacacgtttcgaatcggccagtgcaccggtctgctgagaactacttgcccgtggtcacaaaatctagcggtcacagaaaacagtgcaacacacggttgtggtgtatgggagcttattcatttttagcgttatagatctaaacgtgttgtacatgtaagtgattataagtgtggggtttggtttagtaggcttgtgttgctgttgttgttattatatataaatatagtattttatcgtttgctttaaaacgtaaaataataattatttaaatatgtttctcaataaatagattagtcgactaatcgaaaaaaataatcgttagaataatcgtttaaaaaataatcgttagggacagccctagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204980 True 698 lncRNA 0.39 1 12248490 12249187

Neighbor

gene id symbol gene type direction distance location
LOC103040483 LOC108427120 coding upstream 61257 12183829 ~ 12187233 (+)
creb3l3 NA coding upstream 73082 12129169 ~ 12175408 (+)
LOC103033776 plpp2,LOC103033776,LOC108427214,LOC107558288,LOC107729984,LOC107713693,LOC107667850 coding upstream 441016 11762992 ~ 11807474 (+)
LOC103042008 NA coding upstream 489276 11727535 ~ 11759214 (+)
LOC103034099 NA coding upstream 526815 11714071 ~ 11721675 (+)
LOC103039850 celf5,LOC108444550,LOC108280171,LOC107750904,LOC107667861,LOC107696073,LOC107729965 coding downstream 46296 12295483 ~ 12522294 (+)
LOC107197877 LOC108442433,LOC108280639,LOC106596660,LOC106569828,LOC107750908 coding downstream 599231 12848418 ~ 12875728 (+)
napg napg,LOC107750913,LOC107696142,LOC107687900,LOC107596233 coding downstream 764596 13013783 ~ 13024569 (+)
LOC103038185 NA coding downstream 899922 13149109 ~ 13171989 (+)
LOC103033765 LOC108439882,LOC108280735,LOC107552688,LOC107750941,LOC107696794,LOC107754590 coding downstream 927471 13176658 ~ 13181747 (+)
G151257 NA non-coding upstream 29613 12218558 ~ 12218877 (+)
G151251 NA non-coding upstream 57256 12188790 ~ 12191234 (+)
G151230 ralbp1,LOC107696059 non-coding upstream 144132 12092076 ~ 12104358 (+)
G151229 NA non-coding upstream 153375 12089178 ~ 12095115 (+)
G151226 NA non-coding upstream 155510 11999323 ~ 12092980 (+)
G151272 NA non-coding downstream 43895 12293082 ~ 12293521 (+)
G151302 NA non-coding downstream 294877 12544064 ~ 12607087 (+)
G151347 NA non-coding downstream 482835 12732022 ~ 12734267 (+)
G151377 NA non-coding downstream 528529 12777716 ~ 12812874 (+)
G151410 NA non-coding downstream 744177 12993364 ~ 12993598 (+)
LOC103035375 LOC108427208,LOC108280686,LOC100331938,LOC107713688,LOC107600193,LOC107558294,LOC107729982 other upstream 644449 11587909 ~ 11604041 (+)
LOC103037021 LOC103037021 other upstream 686946 11552539 ~ 11561544 (+)
LOC111194536 NA other upstream 708653 11531569 ~ 11539837 (+)
LOC103037335 LOC108280688,LOC108427207 other upstream 717079 11278365 ~ 11531411 (+)
G150935 NA other upstream 1507352 10740733 ~ 10741138 (+)
LOC103033441 abhd8a,LOC108439870,LOC107696148,LOC107754588,LOC107687901,LOC107596234,LOC108280232,LOC103352801 other downstream 852207 13101394 ~ 13131453 (+)
LOC103033117 LOC108439884,LOC100333521,LOC107696163,LOC107750940 other downstream 853928 13103115 ~ 13109604 (+)
LOC107197015 NA other downstream 980915 13230102 ~ 13236737 (+)
LOC103039742 LOC108439864,LOC108280459 other downstream 1048407 13297594 ~ 13335076 (+)
G151621 NA other downstream 1351422 13600609 ~ 13633602 (+)

Expression


Co-expression Network