CI01000012_06597401_06599198


Basic Information

Item Value
gene id CI01000012_06597401_06599198
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6597288 ~ 6600700 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_06597401_06599198.mRNA
AGCGTTGGGCAAAACTTTTTAGAGTGATCTCTGTCCATCTATCCATCCATCTATCGGTCTGTCTATTTATCGATCTTTATATCAGTCTATTGTTATATTTGTCATTTTGTCTATTAGGTTGTGATGAGATCTCGTGCCACAAGATCTTGCGAGATTAATATGTGACGAGATTTCTTGTTGAGGTGCAAAGCTGTCTCATGATTTTGCTGTGACTGAGTGTGAAATTAGGATAGAATATGCCACCGCTACGTTTACATTACACCTTCACTGTTGTTTTGCTTTTTATAGAAATAAAATCCATTTAATTCAGTTCCCACACGAGCTGCAGAGTTGTACGTTGTGCAGCAGGAATCAGAGTTCACTGATCATGTAACGAGAGTAAGTGACAAGATGACTGACAAGACCATGGCGTAGGATTTGTTGCACAACAGAACCTAAGCTTGTAGAACGCACGCTCAGCACCGCCACTCCCTATTCAGAGTATGCGCAATCGCAAAATCGAAAGCAAAAGAAAAATGTGAGCTCATATTCAAACGTGATTTCAATACCGTGCCTTTTGAAAACACCTCCCTGATGCATGCAGATACCTCCCAATATGACAGCTATCTTAGTCTGGGCTGTGTAGTTGTAACCATCTCTTAGCTCTGTATCAAGCTTGAAGAAAAATTTGGTCTCTATTTGCACTTTGAATATTTATATTTATACTGTTTTTATTTATATGATCAATTTGTGGAAAGGAGTTCAATTAGGAGGTGAAAAGTTGTACATTTCAACATTTCAAATGCATCTGCAGACTATTTTTTTTAGTCATGTATTTCATCATTGAGGATTTCTTAAAAATCTCGTCTTGTTCTCGTGAACTCAATCTCATGTCTCGTCTCATCTCGTGAGCCAACTGTCTTGTCACACCCCTACTGTCTTTCATTCTGTATGTATGTCTCTCTATTGATCTATCTATTGCCCTATAGTTAAATCTGTCATTCTGTTATTCTATCTGTCTGTCTATCTATCATTTTATCTGTTTATCTATTATTTCACATTTATCCATTTAGCAGAGACACTTATCCAAATTTTGAGTTAAAATTCTACATACTGTTTGCTACCTCAACTGAAATTCAGGGATTGAATTGCAATTTAAAAGACATTCTCAATTCAATTCTGAATAGAGCACAACCCTGACGTATACATAAACACATTTCTTCTGGTATGTAGGTTCACATGTAATCCAATGCTTGGTTAGTTTAACAGCCCACAATTTAAACCTGTTTTCTCAGACCCATCTCAATAAGCAGAAGAAGAACAAAACATCAGAGAGAAGCTCTCCAACCCAGACAGACCTCGAACCGACCAATCAAACAGAGCATTCCATGTCCTCAAGCCCCTCGGTTTGACTGCCGGCATGCTAGTTTGTTCAGCCGAGCTATGAAAGCAGTGCTGCCCACCACTTAGAATTCTAATTGGATCCGCTTTCTGAATTCATTGTTTCTTTAGGTGGTTATTAGATGGTTGTGTTTGTTCATATTGATTTCCAAGAGGCAGACGAAAAGAAAAAGAGGCCCAGCAGGAGGCCTCGCTGCGTGGAGAGAAAGGTGAGGGAAGAGAAAAGAGGGAGAGGGGAGGAGAGAGATAAAGCAGCACTAAAAGCAAACACAACTTTAATGAAGCACTTAAATTTTAGGGCTCTGGTTCCCAATTATATTTCACTTGTAAGAGTTCAGTGGCGACAGTGGAGGCACTGCAAACACATGATTATTTCAGAGCCGGTATTGTTTGAGCCTCAAGTTGTGCGCCCTTGTAAAGATTTAATACAAACCCTTGATGCTTATAGCGGAATGACCCCGTCTCCTGGAACACCCAGCTGCCTAAATCTCTTCTCTGATCTTCGGTCTGGCCTTGAACAGATCATTGGCTATAACTCCACAGGAGCTTTTGATCGCATTCACCAGATTTCTGGCAAGATTTGAACTTATTTTCTCTTGTGAATCTCAGTAACTCTTTATGGATCCAATTGCATATTTCAGATGCTCCAAAACAGCTTGTGGAAACTTCTAATGACTCAACTGAATGCAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_06597401_06599198.mRNA True 2077 mRNA 0.39 3 6597288 6600700

Neighbor

gene id symbol gene type direction distance location
CI01000012_06496870_06580459 NA coding downstream 16369 6496143 ~ 6580919 (-)
CI01000012_06406744_06433128 TASP1 coding downstream 164160 6406744 ~ 6433128 (-)
CI01000012_06147833_06153076 NA coding downstream 443085 6147695 ~ 6154203 (-)
CI01000012_05988471_06021245 JAG1B, JAG1 coding downstream 575759 5986816 ~ 6021529 (-)
CI01000012_05932523_05940218 MKKS coding downstream 657070 5932489 ~ 5940218 (-)
CI01000012_06694889_06695185 NA coding upstream 94087 6694787 ~ 6695223 (-)
CI01000012_06713565_06749032 NA coding upstream 112756 6713456 ~ 6749070 (-)
CI01000012_06872835_06911259 NA coding upstream 272015 6872715 ~ 6911968 (-)
CI01000012_06979304_06984075 NA coding upstream 378596 6979296 ~ 6984944 (-)
CI01000012_06989295_06990487 NA coding upstream 388232 6988932 ~ 6990843 (-)
G74215 NA non-coding downstream 60651 6534877 ~ 6536637 (-)
G74066 NA non-coding downstream 269160 6327892 ~ 6328128 (-)
G74063 NA non-coding downstream 272718 6324358 ~ 6324570 (-)
G72707 NA non-coding downstream 293225 6303741 ~ 6304063 (-)
G72699 NA non-coding downstream 299781 6297200 ~ 6297507 (-)
G74142 NA non-coding upstream 169133 6769833 ~ 6858642 (-)
G74252 NA non-coding upstream 414165 7014865 ~ 7020574 (-)
CI01000012_07032479_07034631 NA non-coding upstream 420030 7020730 ~ 7035201 (-)
G74117 NA non-coding upstream 437796 7038496 ~ 7053630 (-)
G72629 NA other downstream 449794 6147011 ~ 6147494 (-)
G72294 NA other downstream 1131431 5462840 ~ 5465857 (-)
CI01000012_05414096_05416676 TTC9 other downstream 1180508 5413369 ~ 5416780 (-)
G72204 NA other downstream 1295082 5293773 ~ 5302206 (-)
G72068 NA other downstream 1817156 4776220 ~ 4780132 (-)
CI01000012_07356934_07358497 NA other upstream 754552 7356863 ~ 7358612 (-)
G74648 NA other upstream 1663629 8264329 ~ 8265654 (-)
G74701 NA other upstream 1766319 8367019 ~ 8367643 (-)
CI01000012_09068458_09070536 NA other upstream 2467206 9067906 ~ 9070765 (-)
CI01000012_09071892_09073410 NA other upstream 2470671 9071371 ~ 9073457 (-)

Expression


Co-expression Network